Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORA52 Gene

Subcategory (RNA class) for SNORA52 Gene


Quality Score for this RNA gene is


Aliases for SNORA52 Gene

  • Small Nucleolar RNA, H/ACA Box 52 2 3
  • ACA52 Small Nucleolar RNA 3
  • ACA52 SnoRNA 3
  • ACA52 3

External Ids for SNORA52 Gene

Previous GeneCards Identifiers for SNORA52 Gene

  • GC11P000803
  • GC11P000629

Summaries for SNORA52 Gene

GeneCards Summary for SNORA52 Gene

SNORA52 (Small Nucleolar RNA, H/ACA Box 52) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA52 Gene

Genomics for SNORA52 Gene

Regulatory Elements for SNORA52 Gene

Genomic Location for SNORA52 Gene

811,681 bp from pter
811,814 bp from pter
134 bases
Plus strand

Genomic View for SNORA52 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA52 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA52 Gene

Proteins for SNORA52 Gene

Post-translational modifications for SNORA52 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA52 Gene

Domains for SNORA52 Gene

Gene Families for SNORA52 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA52: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA52 Gene

Function for SNORA52 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA52 Gene

Localization for SNORA52 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA52 Gene

Pathways for SNORA52 Gene

genes like me logo Genes that share pathways with SNORA52: view

Pathways by source for SNORA52 Gene

1 BioSystems pathway for SNORA52 Gene

Interacting Proteins for SNORA52 Gene

Gene Ontology (GO) - Biological Process for SNORA52 Gene


Transcripts for SNORA52 Gene

mRNA/cDNA for SNORA52 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA52 Gene

No ASD Table

Relevant External Links for SNORA52 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA52 Gene

mRNA expression in normal human tissues for SNORA52 Gene

SOURCE GeneReport for Unigene cluster for SNORA52 Gene Hs.689713

genes like me logo Genes that share expressions with SNORA52: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORA52 Gene

Orthologs for SNORA52 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA52 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Snora52 16
Snora52 36
  • 66 (a)
(Bos Taurus)
Mammalia SNORA52 36
  • 87 (a)
(Canis familiaris)
Mammalia SNORA52 36
  • 83 (a)
(Monodelphis domestica)
Mammalia SNORA52 36
  • 64 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA52 36
  • 69 (a)
SNORA52 36
  • 68 (a)
(Pan troglodytes)
Mammalia SNORA52 36
  • 96 (a)
(Gallus gallus)
Aves SNORA52 36
  • 61 (a)
(Anolis carolinensis)
Reptilia SNORA52 36
  • 51 (a)
Species with no ortholog for SNORA52:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA52 Gene

Gene Tree for SNORA52 (if available)
Gene Tree for SNORA52 (if available)

Paralogs for SNORA52 Gene

No data available for Paralogs for SNORA52 Gene

Variants for SNORA52 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA52 Gene

Variant ID Type Subtype PubMed ID
dgv182e199 CNV Deletion 23128226
dgv921n71 CNV Loss 21882294
nsv469923 CNV Loss 18288195
essv23843 CNV CNV 17122850
dgv936n71 CNV Loss 21882294
dgv944n71 CNV Loss 21882294
dgv945n71 CNV Loss 21882294
dgv946n71 CNV Loss 21882294
nsv896587 CNV Loss 21882294
essv11734 CNV CNV 17122850
nsv8759 CNV Gain 18304495
dgv947n71 CNV Loss 21882294
nsv896599 CNV Loss 21882294
nsv896600 CNV Gain 21882294
nsv832044 CNV Loss 17160897

Relevant External Links for SNORA52 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA52 Gene

Disorders for SNORA52 Gene

No disorders were found for SNORA52 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORA52 Gene

Publications for SNORA52 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  5. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J. … Bakin A. (J. Mol. Biol. 1997) 3

Products for SNORA52 Gene

Sources for SNORA52 Gene

Back to Top