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Aliases for SNORA49 Gene

Subcategory (RNA class) for SNORA49 Gene


Quality Score for this RNA gene is


Aliases for SNORA49 Gene

  • Small Nucleolar RNA, H/ACA Box 49 2 3
  • ACA49 SnoRNA 3
  • ACA49 3

External Ids for SNORA49 Gene

ORGUL Members for SNORA49 Gene

Previous GeneCards Identifiers for SNORA49 Gene

  • GC12P131081
  • GC12P132515
  • GC12P129401

Summaries for SNORA49 Gene

GeneCards Summary for SNORA49 Gene

SNORA49 (Small Nucleolar RNA, H/ACA Box 49) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA49 Gene

Genomics for SNORA49 Gene

Regulatory Elements for SNORA49 Gene

Genomic Location for SNORA49 Gene

132,031,224 bp from pter
132,031,360 bp from pter
137 bases
Plus strand

Genomic View for SNORA49 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA49 Gene

Proteins for SNORA49 Gene

Post-translational modifications for SNORA49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA49 Gene

Domains for SNORA49 Gene

Gene Families for SNORA49 Gene

  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA49: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA49 Gene

Function for SNORA49 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA49 Gene

Localization for SNORA49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA49 Gene

Pathways for SNORA49 Gene

SuperPathways for SNORA49 Gene

No Data Available

Interacting Proteins for SNORA49 Gene

Gene Ontology (GO) - Biological Process for SNORA49 Gene


No data available for Pathways by source for SNORA49 Gene

Transcripts for SNORA49 Gene

mRNA/cDNA for SNORA49 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA49

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA49 Gene

No ASD Table

Relevant External Links for SNORA49 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA49 Gene

mRNA expression in normal human tissues for SNORA49 Gene

SOURCE GeneReport for Unigene cluster for SNORA49 Gene Hs.742405

genes like me logo Genes that share expressions with SNORA49: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORA49 Gene

Orthologs for SNORA49 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA49 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SNORA49 36
  • 81 (a)
(Canis familiaris)
Mammalia SNORA49 36
  • 84 (a)
(Monodelphis domestica)
Mammalia SNORA49 36
  • 85 (a)
(Mus musculus)
Mammalia Gm26079 36
  • 88 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA49 36
  • 84 (a)
(Pan troglodytes)
Mammalia SNORA49 36
  • 100 (a)
Species with no ortholog for SNORA49:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA49 Gene

Gene Tree for SNORA49 (if available)
Gene Tree for SNORA49 (if available)

Paralogs for SNORA49 Gene

No data available for Paralogs for SNORA49 Gene

Variants for SNORA49 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA49 Gene

Variant ID Type Subtype PubMed ID
nsv899699 CNV Gain 21882294
dgv1518n71 CNV Loss 21882294
dgv1519n71 CNV Loss 21882294
dgv1520n71 CNV Loss 21882294

Relevant External Links for SNORA49 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA49 Gene

Disorders for SNORA49 Gene

No disorders were found for SNORA49 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORA49 Gene

Publications for SNORA49 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA49 Gene

Sources for SNORA49 Gene

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