Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORA46 Gene

Subcategory (RNA class) for SNORA46 Gene


Quality Score for this RNA gene is


Aliases for SNORA46 Gene

  • Small Nucleolar RNA, H/ACA Box 46 2 3
  • ACA46 SnoRNA 3
  • ACA46 3

External Ids for SNORA46 Gene

Previous GeneCards Identifiers for SNORA46 Gene

  • GC16M057141
  • GC16M058582
  • GC16M044450

Summaries for SNORA46 Gene

GeneCards Summary for SNORA46 Gene

SNORA46 (Small Nucleolar RNA, H/ACA Box 46) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA46 Gene

Genomics for SNORA46 Gene

Regulatory Elements for SNORA46 Gene

Genomic Location for SNORA46 Gene

58,548,499 bp from pter
58,548,633 bp from pter
135 bases
Minus strand

Genomic View for SNORA46 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA46 Gene

Proteins for SNORA46 Gene

Post-translational modifications for SNORA46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA46 Gene

Domains for SNORA46 Gene

Gene Families for SNORA46 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA46: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA46 Gene

Function for SNORA46 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA46 Gene

Localization for SNORA46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA46 Gene

Pathways for SNORA46 Gene

SuperPathways for SNORA46 Gene

No Data Available

Interacting Proteins for SNORA46 Gene

Gene Ontology (GO) - Biological Process for SNORA46 Gene


No data available for Pathways by source for SNORA46 Gene

Transcripts for SNORA46 Gene

mRNA/cDNA for SNORA46 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA46 Gene

Small nucleolar RNA, H/ACA box 46:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA46 Gene

No ASD Table

Relevant External Links for SNORA46 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA46 Gene

mRNA expression in normal human tissues for SNORA46 Gene

SOURCE GeneReport for Unigene cluster for SNORA46 Gene Hs.688592

genes like me logo Genes that share expressions with SNORA46: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORA46 Gene

Orthologs for SNORA46 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA46 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SNORA46 36
  • 91 (a)
(Canis familiaris)
Mammalia SNORA46 36
  • 92 (a)
(Monodelphis domestica)
Mammalia SNORA46 36
  • 70 (a)
(Mus musculus)
Mammalia Gm26493 36
  • 89 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA46 36
  • 71 (a)
(Pan troglodytes)
Mammalia SNORA46 36
  • 100 (a)
(Gallus gallus)
Aves SNORA46 36
  • 71 (a)
Species with no ortholog for SNORA46:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA46 Gene

Gene Tree for SNORA46 (if available)
Gene Tree for SNORA46 (if available)

Paralogs for SNORA46 Gene

No data available for Paralogs for SNORA46 Gene

Variants for SNORA46 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA46 Gene

Variant ID Type Subtype PubMed ID
dgv893e1 CNV Complex 17122850
nsv521338 CNV Loss 19592680

Relevant External Links for SNORA46 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA46 Gene

Disorders for SNORA46 Gene

No disorders were found for SNORA46 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORA46 Gene

Publications for SNORA46 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA46 Gene

Sources for SNORA46 Gene

Back to Top