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Aliases for SNORA41 Gene

Subcategory (RNA class) for SNORA41 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA41 Gene

  • Small Nucleolar RNA, H/ACA Box 41 2 3
  • ACA41 Small Nucleolar RNA 3
  • ACA41 SnoRNA 3
  • ACA41 3

External Ids for SNORA41 Gene

ORGUL Members for SNORA41 Gene

Summaries for SNORA41 Gene

GeneCards Summary for SNORA41 Gene

SNORA41 (Small Nucleolar RNA, H/ACA Box 41) is a RNA Gene, and belongs to snoRNA RNA class. Among its related pathways are Translation Factors.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA41 Gene

Genomics for SNORA41 Gene

Genomic Location for SNORA41 Gene

Start:
206,162,228 bp from pter
End:
206,162,359 bp from pter
Size:
132 bases
Orientation:
Plus strand

Genomic View for SNORA41 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA41 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA41 Gene

Regulatory Elements for SNORA41 Gene

Proteins for SNORA41 Gene

Post-translational modifications for SNORA41 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA41 Gene

Domains for SNORA41 Gene

Gene Families for SNORA41 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA41: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA41 Gene

Function for SNORA41 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA41 Gene

Localization for SNORA41 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA41 Gene

Pathways for SNORA41 Gene

SuperPathways for SNORA41 Gene

Superpath Contained pathways
1 Translation Factors
genes like me logo Genes that share pathways with SNORA41: view

Pathways by source for SNORA41 Gene

1 BioSystems pathway for SNORA41 Gene

Interacting Proteins for SNORA41 Gene

Gene Ontology (GO) - Biological Process for SNORA41 Gene

None

Transcripts for SNORA41 Gene

mRNA/cDNA for SNORA41 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA41 Gene

No ASD Table

Relevant External Links for SNORA41 Gene

GeneLoc Exon Structure for
SNORA41
ECgene alternative splicing isoforms for
SNORA41

Expression for SNORA41 Gene

mRNA expression in normal human tissues for SNORA41 Gene

SOURCE GeneReport for Unigene cluster for SNORA41 Gene Hs.742407

genes like me logo Genes that share expressions with SNORA41: view

Orthologs for SNORA41 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA41 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA41 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA41 37
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA41 37
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23723 37
  • 88 (a)
OneToMany
Snora41 16
Snora41 37
  • 87 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA41 37
  • 81 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA41 37
  • 76 (a)
OneToOne
Species with no ortholog for SNORA41:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA41 Gene

ENSEMBL:
Gene Tree for SNORA41 (if available)
TreeFam:
Gene Tree for SNORA41 (if available)

Paralogs for SNORA41 Gene

No data available for Paralogs for SNORA41 Gene

Variants for SNORA41 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA41 Gene

Variant ID Type Subtype PubMed ID
nsv875737 CNV Gain 21882294

Relevant External Links for SNORA41 Gene

HapMap Linkage Disequilibrium report
SNORA41

No data available for Sequence variations from dbSNP and Humsavar for SNORA41 Gene

Disorders for SNORA41 Gene

No disorders were found for SNORA41 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA41 Gene

Publications for SNORA41 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. (PMID: 22268729) Liu B. … Wang L.S. (J. Proteome Res. 2012) 3
  5. Pseudouridine distribution in mammalian 18 S ribosomal RNA. A major cluster in the central region of the molecule. (PMID: 3342024) Maden E.H. … Wakeman J.A. (Biochem. J. 1988) 3

Products for SNORA41 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA41
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA41
    • Block miRNA regulation of SNORA41 using miScript Target Protectors

    Sources for SNORA41 Gene

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