Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORA37 Gene

Subcategory (RNA class) for SNORA37 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA37 Gene

  • Small Nucleolar RNA, H/ACA Box 37 2 3 5
  • ACA37 SnoRNA 3
  • ACA37 3

External Ids for SNORA37 Gene

Previous GeneCards Identifiers for SNORA37 Gene

  • GC18M050004
  • GC18M051748
  • GC18M048603

Summaries for SNORA37 Gene

GeneCards Summary for SNORA37 Gene

SNORA37 (Small Nucleolar RNA, H/ACA Box 37) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA37 Gene

Genomics for SNORA37 Gene

Regulatory Elements for SNORA37 Gene

Enhancers for SNORA37 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18F054256 1.1 Ensembl ENCODE 12.3 -35.6 -35589 2.4 GATA3 HLF CEBPA TEAD4 CEBPB CEBPG NR2F6 POLI MBD2 SNORA37 C18orf54 STARD6 GC18P054260
GH18F054259 1.4 FANTOM5 Ensembl ENCODE 12.3 -38.8 -38794 3.5 PKNOX1 CHD4 ZBTB40 RELA GATA3 CTBP1 EGR1 RCOR1 NR2F6 FOS POLI MBD2 SNORA37 C18orf54 GC18P054260
GH18F054263 0.2 ENCODE 12.3 -41.2 -41214 0.2 POLI MBD2 SNORA37 C18orf54 GC18P054260
GH18F054264 0.9 ENCODE 12.3 -41.9 -41914 0.2 MXI1 TBL1XR1 BMI1 RELA POLR2A ELK1 ETV6 ZNF652 CHD2 CBFB MBD2 SNORA37 C18orf54 GC18P054260 POLI
GH18F054246 1.1 Ensembl ENCODE 12.1 -24.9 -24947 2.6 SOX5 MTA2 IKZF1 ZNF143 EBF1 ZNF652 ZBTB40 POLI SNORA37 MBD2 C18orf54 STARD6 ENSG00000264296 GC18P054260
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORA37 on UCSC Golden Path with GeneCards custom track

Promoters for SNORA37 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000526151 -1488 2601 HDGF ATF1 PKNOX1 CREB3L1 MLX ARID4B SIN3A YY1 ZNF121 GLIS2

Genomic Location for SNORA37 Gene

Chromosome:
18
Start:
54,222,284 bp from pter
End:
54,222,412 bp from pter
Size:
129 bases
Orientation:
Minus strand

Genomic View for SNORA37 Gene

Genes around SNORA37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA37 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA37 Gene

Proteins for SNORA37 Gene

Post-translational modifications for SNORA37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA37 Gene

Domains & Families for SNORA37 Gene

Gene Families for SNORA37 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA37: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA37 Gene

Function for SNORA37 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA37 Gene

Localization for SNORA37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA37 Gene

Pathways & Interactions for SNORA37 Gene

SuperPathways for SNORA37 Gene

No Data Available

Interacting Proteins for SNORA37 Gene

Gene Ontology (GO) - Biological Process for SNORA37 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA37 Gene

Transcripts for SNORA37 Gene

mRNA/cDNA for SNORA37 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA37 Gene

Small nucleolar RNA, H/ACA box 37:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA37 Gene

No ASD Table

Relevant External Links for SNORA37 Gene

GeneLoc Exon Structure for
SNORA37
ECgene alternative splicing isoforms for
SNORA37

Expression for SNORA37 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA37 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA37 Gene:

SNORA37

SOURCE GeneReport for Unigene cluster for SNORA37 Gene:

Hs.655869
genes like me logo Genes that share expression patterns with SNORA37: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA37 Gene

Orthologs for SNORA37 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA37 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA30 35
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snora30 35
  • 82 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia SNORA30 35
  • 80 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA30 35
  • 67 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORA30 35
  • 54 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA30 35 35 35 35
  • 53 (a)
ManyToMany
Species where no ortholog for SNORA37 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA37 Gene

ENSEMBL:
Gene Tree for SNORA37 (if available)
TreeFam:
Gene Tree for SNORA37 (if available)

Paralogs for SNORA37 Gene

No data available for Paralogs for SNORA37 Gene

Variants for SNORA37 Gene

Sequence variations from dbSNP and Humsavar for SNORA37 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1060592 -- 54,222,634(-) AACTT(C/T)TTTTA intron-variant, upstream-variant-2KB
rs1060594 -- 54,222,592(-) cagtt(A/G)cgggg intron-variant, upstream-variant-2KB
rs111496125 -- 54,223,801(+) TTCCA(C/T)ATAAG intron-variant, upstream-variant-2KB
rs111585440 -- 54,223,250(+) ACCTT(C/G)AATCA intron-variant, upstream-variant-2KB
rs1137690 -- 54,222,591(-) AGTTA(C/T)GGGGC intron-variant, upstream-variant-2KB

Relevant External Links for SNORA37 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA37

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA37 Gene

Disorders for SNORA37 Gene

Relevant External Links for SNORA37

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA37

No disorders were found for SNORA37 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA37 Gene

Publications for SNORA37 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 64
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORA37 Gene

Sources for SNORA37 Gene

Content
Loading form....