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Aliases for SNORA35 Gene

Subcategory (RNA class) for SNORA35 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA35 Gene

  • Small Nucleolar RNA, H/ACA Box 35 2 3
  • HBI-36 3

External Ids for SNORA35 Gene

ORGUL Members for SNORA35 Gene

Previous GeneCards Identifiers for SNORA35 Gene

  • GC0XP113771
  • GC0XP113865
  • GC0XP103451

Summaries for SNORA35 Gene

GeneCards Summary for SNORA35 Gene

SNORA35 (Small Nucleolar RNA, H/ACA Box 35) is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for SNORA35 Gene

  • Small nucleolar RNA SNORA35: The snoRNA HBI-36 snoRNA belongs to the H/ACA family of snoRNAs and is specifically expressed in the brain, specifically in the choroids plexus. No RNA target has been identified.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA35 Gene

Genomics for SNORA35 Gene

Regulatory Elements for SNORA35 Gene

Genomic Location for SNORA35 Gene

Start:
114,630,797 bp from pter
End:
114,630,924 bp from pter
Size:
128 bases
Orientation:
Plus strand

Genomic View for SNORA35 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA35 Gene

Proteins for SNORA35 Gene

Post-translational modifications for SNORA35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA35 Gene

Domains for SNORA35 Gene

Gene Families for SNORA35 Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA35: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA35 Gene

Function for SNORA35 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA35 Gene

Localization for SNORA35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA35 Gene

Pathways for SNORA35 Gene

SuperPathways for SNORA35 Gene

No Data Available

Interacting Proteins for SNORA35 Gene

Gene Ontology (GO) - Biological Process for SNORA35 Gene

None

No data available for Pathways by source for SNORA35 Gene

Transcripts for SNORA35 Gene

mRNA/cDNA for SNORA35 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA35

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA35 Gene

No ASD Table

Relevant External Links for SNORA35 Gene

GeneLoc Exon Structure for
SNORA35
ECgene alternative splicing isoforms for
SNORA35

Expression for SNORA35 Gene

mRNA expression in normal human tissues for SNORA35 Gene

SOURCE GeneReport for Unigene cluster for SNORA35 Gene Hs.693123

genes like me logo Genes that share expressions with SNORA35: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA35 Gene

Orthologs for SNORA35 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA35 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORA35 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA35 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snora35 16
Snora35 36
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA35 36
  • 56 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA35 36
  • 54 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA35 36
  • 53 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA35 36
  • 53 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA35 36
  • 50 (a)
OneToMany
Species with no ortholog for SNORA35:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA35 Gene

ENSEMBL:
Gene Tree for SNORA35 (if available)
TreeFam:
Gene Tree for SNORA35 (if available)

Paralogs for SNORA35 Gene

No data available for Paralogs for SNORA35 Gene

Variants for SNORA35 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA35 Gene

Variant ID Type Subtype PubMed ID
esv33994 CNV Gain+Loss 17666407
nsv527347 CNV Gain 19592680

Relevant External Links for SNORA35 Gene

HapMap Linkage Disequilibrium report
SNORA35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA35 Gene

Disorders for SNORA35 Gene

No disorders were found for SNORA35 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA35 Gene

Publications for SNORA35 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA35 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA35
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA35
    • Block miRNA regulation of SNORA35 using miScript Target Protectors

    Sources for SNORA35 Gene

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