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Aliases for SNORA33 Gene

Subcategory (RNA class) for SNORA33 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA33 Gene

  • Small Nucleolar RNA, H/ACA Box 33 2 3
  • ACA33 Small Nucleolar RNA 3
  • ACA33 SnoRNA 3
  • ACA33 3

External Ids for SNORA33 Gene

Summaries for SNORA33 Gene

GeneCards Summary for SNORA33 Gene

SNORA33 (Small Nucleolar RNA, H/ACA Box 33) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA33 Gene

Genomics for SNORA33 Gene

Genomic Location for SNORA33 Gene

Start:
132,817,219 bp from pter
End:
132,817,351 bp from pter
Size:
133 bases
Orientation:
Plus strand

Genomic View for SNORA33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA33 Gene

Regulatory Elements for SNORA33 Gene

Proteins for SNORA33 Gene

Post-translational modifications for SNORA33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA33 Gene

Domains for SNORA33 Gene

Gene Families for SNORA33 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA33: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA33 Gene

Function for SNORA33 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA33 Gene

Localization for SNORA33 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA33 Gene

Pathways for SNORA33 Gene

SuperPathways for SNORA33 Gene

No Data Available

Interacting Proteins for SNORA33 Gene

Gene Ontology (GO) - Biological Process for SNORA33 Gene

None

No data available for Pathways by source for SNORA33 Gene

Transcripts for SNORA33 Gene

mRNA/cDNA for SNORA33 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA33 Gene

Small nucleolar RNA, H/ACA box 33:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA33 Gene

No ASD Table

Relevant External Links for SNORA33 Gene

GeneLoc Exon Structure for
SNORA33
ECgene alternative splicing isoforms for
SNORA33

Expression for SNORA33 Gene

mRNA expression in normal human tissues for SNORA33 Gene

SOURCE GeneReport for Unigene cluster for SNORA33 Gene Hs.671378

genes like me logo Genes that share expressions with SNORA33: view

Orthologs for SNORA33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA33 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA33 37
  • 86 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA33 37
  • 86 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Snora33 16
Snora33 37
  • 78 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA33 37
  • 70 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA33 37
  • 61 (a)
OneToMany
Species with no ortholog for SNORA33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA33 Gene

ENSEMBL:
Gene Tree for SNORA33 (if available)
TreeFam:
Gene Tree for SNORA33 (if available)

Paralogs for SNORA33 Gene

No data available for Paralogs for SNORA33 Gene

Variants for SNORA33 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA33 Gene

Variant ID Type Subtype PubMed ID
nsv886676 CNV Loss 21882294

Relevant External Links for SNORA33 Gene

HapMap Linkage Disequilibrium report
SNORA33

No data available for Sequence variations from dbSNP and Humsavar for SNORA33 Gene

Disorders for SNORA33 Gene

Relevant External Links for SNORA33

Genetic Association Database (GAD)
SNORA33
genes like me logo Genes that share disorders with SNORA33: view

No data available for UniProtKB/Swiss-Prot for SNORA33 Gene

Publications for SNORA33 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 49

Products for SNORA33 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA33
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA33
    • Block miRNA regulation of SNORA33 using miScript Target Protectors

    Sources for SNORA33 Gene

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