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Aliases for SNORA31 Gene

Subcategory (RNA class) for SNORA31 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA31 Gene

  • Small Nucleolar RNA, H/ACA Box 31 2 3
  • ACA31 SnoRNA 3
  • ACA31 3

External Ids for SNORA31 Gene

Summaries for SNORA31 Gene

GeneCards Summary for SNORA31 Gene

SNORA31 (Small Nucleolar RNA, H/ACA Box 31) is an RNA Gene, and belongs to the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA31 Gene

Genomics for SNORA31 Gene

Genomic Location for SNORA31 Gene

Start:
45,337,480 bp from pter
End:
45,337,609 bp from pter
Size:
130 bases
Orientation:
Minus strand

Genomic View for SNORA31 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA31 Gene

Regulatory Elements for SNORA31 Gene

Proteins for SNORA31 Gene

Post-translational modifications for SNORA31 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA31 Gene

Domains for SNORA31 Gene

Gene Families for SNORA31 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA31: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA31 Gene

Function for SNORA31 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA31 Gene

Localization for SNORA31 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA31 Gene

Pathways for SNORA31 Gene

SuperPathways for SNORA31 Gene

No Data Available

Interacting Proteins for SNORA31 Gene

Gene Ontology (GO) - Biological Process for SNORA31 Gene

None

No data available for Pathways by source for SNORA31 Gene

Transcripts for SNORA31 Gene

mRNA/cDNA for SNORA31 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA31 Gene

No ASD Table

Relevant External Links for SNORA31 Gene

GeneLoc Exon Structure for
SNORA31
ECgene alternative splicing isoforms for
SNORA31

Expression for SNORA31 Gene

mRNA expression in normal human tissues for SNORA31 Gene

genes like me logo Genes that share expressions with SNORA31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA31 Gene

Orthologs for SNORA31 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA31 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA31 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA31 36
  • 86 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA31 36
  • 92 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25011 36
  • 67 (a)
OneToOne
Snora31 16
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA31 36
  • 76 (a)
ManyToMany
SNORA31 36
  • 79 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA31 36
  • 79 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA31 36
  • 59 (a)
OneToMany
Species with no ortholog for SNORA31:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA31 Gene

ENSEMBL:
Gene Tree for SNORA31 (if available)
TreeFam:
Gene Tree for SNORA31 (if available)

Paralogs for SNORA31 Gene

No data available for Paralogs for SNORA31 Gene

Variants for SNORA31 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA31 Gene

Variant ID Type Subtype PubMed ID
nsv510579 CNV Loss 20534489

Relevant External Links for SNORA31 Gene

HapMap Linkage Disequilibrium report
SNORA31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA31 Gene

Disorders for SNORA31 Gene

No disorders were found for SNORA31 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA31 Gene

Publications for SNORA31 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA31 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA31
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA31
    • Block miRNA regulation of SNORA31 using miScript Target Protectors

    Sources for SNORA31 Gene

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