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Aliases for SNORA2A Gene

Subcategory (RNA class) for SNORA2A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA2A Gene

  • Small Nucleolar RNA, H/ACA Box 2A 2 3
  • ACA2a SnoRNA 3
  • ACA2A 3

External Ids for SNORA2A Gene

ORGUL Members for SNORA2A Gene

Summaries for SNORA2A Gene

GeneCards Summary for SNORA2A Gene

SNORA2A (Small Nucleolar RNA, H/ACA Box 2A) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA2A Gene

Genomics for SNORA2A Gene

Genomic Location for SNORA2A Gene

Start:
48,656,648 bp from pter
End:
48,656,782 bp from pter
Size:
135 bases
Orientation:
Minus strand

Genomic View for SNORA2A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA2A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA2A Gene

Regulatory Elements for SNORA2A Gene

Proteins for SNORA2A Gene

Post-translational modifications for SNORA2A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA2A Gene

Domains for SNORA2A Gene

Gene Families for SNORA2A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA2A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA2A Gene

Function for SNORA2A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA2A Gene

Localization for SNORA2A Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA2A Gene

Pathways for SNORA2A Gene

SuperPathways for SNORA2A Gene

No Data Available

Interacting Proteins for SNORA2A Gene

Gene Ontology (GO) - Biological Process for SNORA2A Gene

None

No data available for Pathways by source for SNORA2A Gene

Transcripts for SNORA2A Gene

mRNA/cDNA for SNORA2A Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA2A Gene

Small nucleolar RNA, H/ACA box 2A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA2A Gene

No ASD Table

Relevant External Links for SNORA2A Gene

GeneLoc Exon Structure for
SNORA2A
ECgene alternative splicing isoforms for
SNORA2A

Expression for SNORA2A Gene

mRNA expression in normal human tissues for SNORA2A Gene

SOURCE GeneReport for Unigene cluster for SNORA2A Gene Hs.689723

genes like me logo Genes that share expressions with SNORA2A: view

Orthologs for SNORA2A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA2A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA2 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA2 37
  • 86 (a)
ManyToMany
SNORA2 37
  • 86 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA2 37
  • 82 (a)
ManyToMany
SNORA2 37
  • 82 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22683 37
  • 69 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA2 37
  • 81 (a)
ManyToMany
SNORA2 37
  • 80 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA2 37
  • 71 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA2 37
  • 63 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA2 37
  • 73 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA2 37
  • 64 (a)
OneToMany
Species with no ortholog for SNORA2A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA2A Gene

ENSEMBL:
Gene Tree for SNORA2A (if available)
TreeFam:
Gene Tree for SNORA2A (if available)

Paralogs for SNORA2A Gene

No data available for Paralogs for SNORA2A Gene

Variants for SNORA2A Gene

Relevant External Links for SNORA2A Gene

HapMap Linkage Disequilibrium report
SNORA2A

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SNORA2A Gene

Disorders for SNORA2A Gene

No disorders were found for SNORA2A Gene.

No data available for UniProtKB/Swiss-Prot for SNORA2A Gene

Publications for SNORA2A Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA2A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA2A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA2A
    • Block miRNA regulation of SNORA2A using miScript Target Protectors

    Sources for SNORA2A Gene

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