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Aliases for SNORA2A Gene

Subcategory (RNA class) for SNORA2A Gene


Quality Score for this RNA gene is


Aliases for SNORA2A Gene

  • Small Nucleolar RNA, H/ACA Box 2A 2 3 5
  • ACA2a SnoRNA 3
  • ACA2A 3

External Ids for SNORA2A Gene

ORGUL Members for SNORA2A Gene

Previous GeneCards Identifiers for SNORA2A Gene

  • GC12M047340
  • GC12M049051
  • GC12M046084
  • GC12M049055
  • GC12M049060
  • GC12M049068
  • GC12M049078
  • GC12M049091

Summaries for SNORA2A Gene

GeneCards Summary for SNORA2A Gene

SNORA2A (Small Nucleolar RNA, H/ACA Box 2A) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA2A Gene

Genomics for SNORA2A Gene

Regulatory Elements for SNORA2A Gene

Genomic Location for SNORA2A Gene

48,656,648 bp from pter
48,656,782 bp from pter
135 bases
Minus strand

Genomic View for SNORA2A Gene

Genes around SNORA2A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA2A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA2A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA2A Gene

Proteins for SNORA2A Gene

Post-translational modifications for SNORA2A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA2A Gene

Domains & Families for SNORA2A Gene

Gene Families for SNORA2A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA2A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA2A Gene

Function for SNORA2A Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA2A Gene

Localization for SNORA2A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA2A Gene

Pathways & Interactions for SNORA2A Gene

SuperPathways for SNORA2A Gene

No Data Available

Interacting Proteins for SNORA2A Gene

Gene Ontology (GO) - Biological Process for SNORA2A Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA2A Gene

Transcripts for SNORA2A Gene

mRNA/cDNA for SNORA2A Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA2A Gene

Small nucleolar RNA, H/ACA box 2A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA2A Gene

No ASD Table

Relevant External Links for SNORA2A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA2A Gene

mRNA expression in normal human tissues for SNORA2A Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA2A Gene:


SOURCE GeneReport for Unigene cluster for SNORA2A Gene:

genes like me logo Genes that share expression patterns with SNORA2A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA2A Gene

Orthologs for SNORA2A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA2A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA2 35
  • 99 (a)
(Bos Taurus)
Mammalia SNORA2 35 35
  • 86 (a)
(Canis familiaris)
Mammalia SNORA2 35 35
  • 82 (a)
(Monodelphis domestica)
Mammalia SNORA2 35 35
  • 81 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA2 35
  • 71 (a)
(Mus musculus)
Mammalia Gm22683 35
  • 69 (a)
(Gallus gallus)
Aves SNORA2 35
  • 63 (a)
(Anolis carolinensis)
Reptilia SNORA2 35
  • 73 (a)
(Danio rerio)
Actinopterygii SNORA2 35
  • 64 (a)
Species where no ortholog for SNORA2A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA2A Gene

Gene Tree for SNORA2A (if available)
Gene Tree for SNORA2A (if available)

Paralogs for SNORA2A Gene

No data available for Paralogs for SNORA2A Gene

Variants for SNORA2A Gene

Sequence variations from dbSNP and Humsavar for SNORA2A Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs111279916 -- 48,657,619(+) GTGTG(C/T)GCGTG intron-variant, upstream-variant-2KB
rs111413314 -- 48,657,501(+) ATTCA(-/T)TTTCA intron-variant, upstream-variant-2KB
rs11168671 -- 48,656,204(+) TTCCT(C/T)TGAAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs112409092 -- 48,657,621(+) GTGTG(C/T)GTGCG intron-variant, upstream-variant-2KB
rs113836699 -- 48,657,620(+) TGTGT(A/G)CGTGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORA2A Gene

Variant ID Type Subtype PubMed ID
dgv1496n100 CNV gain 25217958

Relevant External Links for SNORA2A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA2A Gene

Disorders for SNORA2A Gene

Relevant External Links for SNORA2A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA2A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA2A Gene

Publications for SNORA2A Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 64
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3 64
  3. Clozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles. (PMID: 25187353) Goldstein J.I. … Sullivan P.F. (Nat Commun 2014) 3 64
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORA2A Gene

Sources for SNORA2A Gene

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