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Aliases for SNORA27 Gene

Subcategory (RNA class) for SNORA27 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA27 Gene

  • Small Nucleolar RNA, H/ACA Box 27 2 3
  • ACA27 Small Nucleolar RNA 3
  • ACA27 SnoRNA 3
  • ACA27 3

External Ids for SNORA27 Gene

Summaries for SNORA27 Gene

GeneCards Summary for SNORA27 Gene

SNORA27 (Small Nucleolar RNA, H/ACA Box 27) is a RNA Gene, and belongs to snoRNA RNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA27 Gene

Genomics for SNORA27 Gene

Genomic Location for SNORA27 Gene

Start:
27,255,401 bp from pter
End:
27,255,526 bp from pter
Size:
126 bases
Orientation:
Plus strand

Genomic View for SNORA27 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA27 Gene

Regulatory Elements for SNORA27 Gene

Proteins for SNORA27 Gene

Post-translational modifications for SNORA27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA27 Gene

Domains for SNORA27 Gene

Gene Families for SNORA27 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA27: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA27 Gene

Function for SNORA27 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA27 Gene

Localization for SNORA27 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA27 Gene

Pathways for SNORA27 Gene

genes like me logo Genes that share pathways with SNORA27: view

Pathways by source for SNORA27 Gene

1 BioSystems pathway for SNORA27 Gene

Interacting Proteins for SNORA27 Gene

Gene Ontology (GO) - Biological Process for SNORA27 Gene

None

Transcripts for SNORA27 Gene

mRNA/cDNA for SNORA27 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA27 Gene

No ASD Table

Relevant External Links for SNORA27 Gene

GeneLoc Exon Structure for
SNORA27
ECgene alternative splicing isoforms for
SNORA27

Expression for SNORA27 Gene

mRNA expression in normal human tissues for SNORA27 Gene

SOURCE GeneReport for Unigene cluster for SNORA27 Gene Hs.689719

genes like me logo Genes that share expressions with SNORA27: view

Orthologs for SNORA27 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA27 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA27 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA27 37
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA27 37
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23202 37
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA27 37
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA27 37
  • 79 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA27 37
  • 79 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORA27 37
  • 70 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORA27 37
  • 56 (a)
OneToMany
Species with no ortholog for SNORA27:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA27 Gene

ENSEMBL:
Gene Tree for SNORA27 (if available)
TreeFam:
Gene Tree for SNORA27 (if available)

Paralogs for SNORA27 Gene

No data available for Paralogs for SNORA27 Gene

Variants for SNORA27 Gene

Relevant External Links for SNORA27 Gene

HapMap Linkage Disequilibrium report
SNORA27

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SNORA27 Gene

Disorders for SNORA27 Gene

No disorders were found for SNORA27 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA27 Gene

Publications for SNORA27 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J. … Bakin A. (J. Mol. Biol. 1997) 3

Products for SNORA27 Gene

Sources for SNORA27 Gene

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