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Aliases for SNORA24 Gene

Subcategory (RNA class) for SNORA24 Gene


Quality Score for this RNA gene is


Aliases for SNORA24 Gene

  • Small Nucleolar RNA, H/ACA Box 24 2 3 5
  • ACA24 SnoRNA 3
  • ACA53 SnoRNA 3
  • SNORA24A 3
  • ACA24 3

External Ids for SNORA24 Gene

ORGUL Members for SNORA24 Gene

Previous GeneCards Identifiers for SNORA24 Gene

  • GC04P119419
  • GC04P119200
  • GC04P114936

Summaries for SNORA24 Gene

GeneCards Summary for SNORA24 Gene

SNORA24 (Small Nucleolar RNA, H/ACA Box 24) is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for SNORA24 Gene - the ORGUL cluster for this gene includes several descriptions:

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

  • Small nucleolar RNA SNORA24: ACA24 is a member of the H/ACA class of snoRNA that guide the sites of modification of uridines to pseudouridines [1].

View fRNAdb secondary structures for SNORA24

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA24 Gene

Genomics for SNORA24 Gene

Regulatory Elements for SNORA24 Gene

Enhancers for SNORA24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F118352 0.9 ENCODE 11.3 +73.5 73486 2.5 SIN3A ZNF2 RAD21 ZEB1 GLIS2 ZNF143 REST ZEB2 ZFP69B CBX8 SNORA24 PRSS12 SNHG8
GH04F118337 0.7 Ensembl ENCODE 10.8 +60.2 60154 3.8 JUND FOS ATF2 SNORA24 SNHG8 CICP16 PRSS12
GH04F118335 0.4 ENCODE 11.8 +56.3 56341 0.1 SMARCA4 POLR2A SNORA24 PRSS12
GH04F118275 1.1 ENCODE 0.8 +0.3 311 7.7 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 SNHG8 FKBP4P1 LOC105377391 LOC105377389 CEP170P1 LOC729218 SNORA24 PRSS12
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORA24 on UCSC Golden Path with GeneCards custom track

Promoters for SNORA24 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for SNORA24 Gene

118,279,190 bp from pter
118,279,320 bp from pter
131 bases
Plus strand

Genomic View for SNORA24 Gene

Genes around SNORA24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA24 Gene

ORGUL Member Location for SNORA24 Gene

ORGUL Member Location for SNORA24 gene

Proteins for SNORA24 Gene

Post-translational modifications for SNORA24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA24 Gene

Domains & Families for SNORA24 Gene

Gene Families for SNORA24 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA24: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA24 Gene

Function for SNORA24 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA24 Gene

Localization for SNORA24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA24 Gene

Pathways & Interactions for SNORA24 Gene

SuperPathways for SNORA24 Gene

No Data Available

Interacting Proteins for SNORA24 Gene

Gene Ontology (GO) - Biological Process for SNORA24 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA24 Gene

Transcripts for SNORA24 Gene

fRNAdb Secondary structures for SNORA24 Gene

  • FR054628

mRNA/cDNA for SNORA24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA24 Gene

No ASD Table

Relevant External Links for SNORA24 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA24 Gene

mRNA expression in normal human tissues for SNORA24 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA24 Gene:


SOURCE GeneReport for Unigene cluster for SNORA24 Gene:

genes like me logo Genes that share expression patterns with SNORA24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA24 Gene

Orthologs for SNORA24 Gene

Evolution for SNORA24 Gene

Gene Tree for SNORA24 (if available)
Gene Tree for SNORA24 (if available)

No data available for Orthologs for SNORA24 Gene

Paralogs for SNORA24 Gene

No data available for Paralogs for SNORA24 Gene

Variants for SNORA24 Gene

Sequence variations from dbSNP and Humsavar for SNORA24 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1053519 -- 118,279,007(+) GCCCT(C/G)GGGGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1063890 -- 118,279,123(+) CCGTC(A/G)GTTTG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1063891 -- 118,279,125(+) GTCAG(G/T)TTGAG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs113479481 -- 118,279,388(+) TTCTA(A/G)GAAGC downstream-variant-500B, splice-acceptor-variant
rs113544583 -- 118,279,722(+) TCCTG(C/G)AAGTT nc-transcript-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNORA24 Gene

Variant ID Type Subtype PubMed ID
nsv519017 CNV loss 19592680
nsv1002771 CNV gain 25217958
esv3894015 CNV gain 25118596
esv34354 CNV gain 17911159
esv34038 CNV loss 18971310
esv2759279 CNV gain 17122850
dgv5372n100 CNV loss 25217958

Relevant External Links for SNORA24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA24 Gene

Disorders for SNORA24 Gene

Relevant External Links for SNORA24

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA24 Gene

Publications for SNORA24 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 1 2 3 64
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 1 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64
  4. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  5. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1

Products for SNORA24 Gene

Sources for SNORA24 Gene

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