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Aliases for SNORA22 Gene

Subcategory (RNA class) for SNORA22 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA22 Gene

  • Small Nucleolar RNA, H/ACA Box 22 2 3
  • ACA22 SnoRNA 3
  • ACA22 3

External Ids for SNORA22 Gene

Previous GeneCards Identifiers for SNORA22 Gene

  • GC07P064857
  • GC07P065221
  • GC07P061408
  • GC07P065226

Summaries for SNORA22 Gene

GeneCards Summary for SNORA22 Gene

SNORA22 (Small Nucleolar RNA, H/ACA Box 22) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA22 Gene

Genomics for SNORA22 Gene

Regulatory Elements for SNORA22 Gene

Genomic Location for SNORA22 Gene

Start:
65,755,526 bp from pter
End:
65,755,659 bp from pter
Size:
134 bases
Orientation:
Plus strand

Genomic View for SNORA22 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA22 Gene

Proteins for SNORA22 Gene

Post-translational modifications for SNORA22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA22 Gene

Domains for SNORA22 Gene

Gene Families for SNORA22 Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA22: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA22 Gene

Function for SNORA22 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA22 Gene

Localization for SNORA22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA22 Gene

Pathways for SNORA22 Gene

SuperPathways for SNORA22 Gene

No Data Available

Interacting Proteins for SNORA22 Gene

Gene Ontology (GO) - Biological Process for SNORA22 Gene

None

No data available for Pathways by source for SNORA22 Gene

Transcripts for SNORA22 Gene

mRNA/cDNA for SNORA22 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA22 Gene

Small nucleolar RNA, H/ACA box 22:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA22

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA22 Gene

No ASD Table

Relevant External Links for SNORA22 Gene

GeneLoc Exon Structure for
SNORA22
ECgene alternative splicing isoforms for
SNORA22

Expression for SNORA22 Gene

mRNA expression in normal human tissues for SNORA22 Gene

SOURCE GeneReport for Unigene cluster for SNORA22 Gene Hs.675336

genes like me logo Genes that share expressions with SNORA22: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORA22 Gene

Orthologs for SNORA22 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA22 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORA22 36
  • 93 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA22 36
  • 91 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA22 36
  • 82 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm23245 36
  • 87 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA22 36
  • 77 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA22 36
  • 99 (a)
OneToMany
SNORA22 36
  • 99 (a)
OneToMany
SNORA22 36
  • 99 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA22 36
  • 82 (a)
OneToMany
Species with no ortholog for SNORA22:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA22 Gene

ENSEMBL:
Gene Tree for SNORA22 (if available)
TreeFam:
Gene Tree for SNORA22 (if available)

Paralogs for SNORA22 Gene

No data available for Paralogs for SNORA22 Gene

Variants for SNORA22 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA22 Gene

Variant ID Type Subtype PubMed ID
dgv1147e201 CNV Deletion 23290073
dgv226e55 CNV Loss 17911159
nsv517778 CNV Gain+Loss 19592680
esv2734586 CNV Deletion 23290073
dgv1213e199 CNV Deletion 23128226
dgv2088e1 CNV Complex 17122850
dgv229e55 CNV Loss 17911159
nsv888320 CNV Gain 21882294
dgv2090e1 CNV Complex 17122850
nsv819275 CNV Gain 19587683

Relevant External Links for SNORA22 Gene

HapMap Linkage Disequilibrium report
SNORA22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA22 Gene

Disorders for SNORA22 Gene

No disorders were found for SNORA22 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORA22 Gene

Publications for SNORA22 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA22 Gene

Sources for SNORA22 Gene

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