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Aliases for SNORA21 Gene

Subcategory (RNA class) for SNORA21 Gene


Quality Score for this RNA gene is


Aliases for SNORA21 Gene

  • Small Nucleolar RNA, H/ACA Box 21 2 3 5
  • ACA21 Small Nucleolar RNA 3
  • ACA21 SnoRNA 3
  • ACA21 3

External Ids for SNORA21 Gene

Previous GeneCards Identifiers for SNORA21 Gene

  • GC17M034266
  • GC17M037010
  • GC17M032804
  • GC17M037015
  • GC17M037024
  • GC17M037027

Summaries for SNORA21 Gene

GeneCards Summary for SNORA21 Gene

SNORA21 (Small Nucleolar RNA, H/ACA Box 21) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA21 Gene

Genomics for SNORA21 Gene

Regulatory Elements for SNORA21 Gene

Enhancers for SNORA21 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SNORA21 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA21 Gene

38,852,863 bp from pter
38,852,995 bp from pter
133 bases
Minus strand

Genomic View for SNORA21 Gene

Genes around SNORA21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA21 Gene

Proteins for SNORA21 Gene

Post-translational modifications for SNORA21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA21 Gene

Domains & Families for SNORA21 Gene

Gene Families for SNORA21 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA21: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA21 Gene

Function for SNORA21 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA21 Gene

Localization for SNORA21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA21 Gene

Pathways & Interactions for SNORA21 Gene

SuperPathways for SNORA21 Gene

No Data Available

Interacting Proteins for SNORA21 Gene

Gene Ontology (GO) - Biological Process for SNORA21 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA21 Gene

Drugs & Compounds for SNORA21 Gene

No Compound Related Data Available

Transcripts for SNORA21 Gene

mRNA/cDNA for SNORA21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA21 Gene

No ASD Table

Relevant External Links for SNORA21 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA21 Gene

mRNA expression in normal human tissues for SNORA21 Gene

SOURCE GeneReport for Unigene cluster for SNORA21 Gene Hs.738742

genes like me logo Genes that share expression patterns with SNORA21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA21 Gene

Orthologs for SNORA21 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA21 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SNORA21 36
  • 87 (a)
(Canis familiaris)
Mammalia SNORA21 36
  • 86 (a)
(Monodelphis domestica)
Mammalia SNORA21 36
  • 74 (a)
(Mus musculus)
Mammalia Snora21 36
  • 85 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA21 36
  • 71 (a)
(Pan troglodytes)
Mammalia SNORA21 36
  • 100 (a)
(Gallus gallus)
Aves SNORA21 36
  • 73 (a)
(Anolis carolinensis)
Reptilia SNORA21 36
  • 71 (a)
SNORA21 36
  • 59 (a)
(Danio rerio)
Actinopterygii SNORA21 36
  • 60 (a)
SNORA21 36
  • 59 (a)
Species with no ortholog for SNORA21:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA21 Gene

Gene Tree for SNORA21 (if available)
Gene Tree for SNORA21 (if available)

Paralogs for SNORA21 Gene

No data available for Paralogs for SNORA21 Gene

Variants for SNORA21 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA21 Gene

Variant ID Type Subtype PubMed ID
nsv833439 CNV Loss 17160897
nsv908199 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SNORA21 Gene

Disorders for SNORA21 Gene

Relevant External Links for SNORA21

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA21 Gene

Publications for SNORA21 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 67
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  3. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J. … Bakin A. (J. Mol. Biol. 1997) 2 3
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  5. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA21 Gene

Sources for SNORA21 Gene