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Aliases for SNORA19 Gene

Subcategory (RNA class) for SNORA19 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA19 Gene

  • Small Nucleolar RNA, H/ACA Box 19 2 3
  • ACA19 Small Nucleolar RNA 3
  • ACA19 3

External Ids for SNORA19 Gene

Previous GeneCards Identifiers for SNORA19 Gene

  • GC10M120813
  • GC10M120815
  • GC10M120818
  • GC10M114448
  • GC10M120821
  • GC10M120825
  • GC10M120828

Summaries for SNORA19 Gene

GeneCards Summary for SNORA19 Gene

SNORA19 (Small Nucleolar RNA, H/ACA Box 19) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA19 Gene

Genomics for SNORA19 Gene

Regulatory Elements for SNORA19 Gene

Genomic Location for SNORA19 Gene

Start:
119,060,011 bp from pter
End:
119,060,138 bp from pter
Size:
128 bases
Orientation:
Minus strand

Genomic View for SNORA19 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA19 Gene

Proteins for SNORA19 Gene

Post-translational modifications for SNORA19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA19 Gene

Domains for SNORA19 Gene

Gene Families for SNORA19 Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA19: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA19 Gene

Function for SNORA19 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA19 Gene

Localization for SNORA19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA19 Gene

Pathways for SNORA19 Gene

SuperPathways for SNORA19 Gene

No Data Available

Interacting Proteins for SNORA19 Gene

Gene Ontology (GO) - Biological Process for SNORA19 Gene

None

No data available for Pathways by source for SNORA19 Gene

Transcripts for SNORA19 Gene

mRNA/cDNA for SNORA19 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA19 Gene

Small nucleolar RNA, H/ACA box 19:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA19 Gene

No ASD Table

Relevant External Links for SNORA19 Gene

GeneLoc Exon Structure for
SNORA19
ECgene alternative splicing isoforms for
SNORA19

Expression for SNORA19 Gene

mRNA expression in normal human tissues for SNORA19 Gene

SOURCE GeneReport for Unigene cluster for SNORA19 Gene Hs.688653

genes like me logo Genes that share expressions with SNORA19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA19 Gene

Orthologs for SNORA19 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA19 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA19 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA19 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA19 36
  • 90 (a)
OneToMany
SNORA19 36
  • 69 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm23658 36
  • 89 (a)
OneToMany
Gm24625 36
  • 81 (a)
OneToMany
Snora19 16
Snora19 36
  • 89 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA19 36
  • 81 (a)
OneToMany
SNORA19 36
  • 82 (a)
OneToMany
SNORA19 36
  • 77 (a)
OneToMany
SNORA19 36
  • 75 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA19 36
  • 82 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA19 36
  • 80 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORA19 36
  • 74 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORA19 36
  • 66 (a)
OneToMany
Species with no ortholog for SNORA19:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA19 Gene

ENSEMBL:
Gene Tree for SNORA19 (if available)
TreeFam:
Gene Tree for SNORA19 (if available)

Paralogs for SNORA19 Gene

No data available for Paralogs for SNORA19 Gene

Variants for SNORA19 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA19 Gene

Variant ID Type Subtype PubMed ID
nsv825582 CNV Gain 20364138

Relevant External Links for SNORA19 Gene

HapMap Linkage Disequilibrium report
SNORA19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA19 Gene

Disorders for SNORA19 Gene

No disorders were found for SNORA19 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA19 Gene

Publications for SNORA19 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J. … Bakin A. (J. Mol. Biol. 1997) 3

Products for SNORA19 Gene

Sources for SNORA19 Gene

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