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Aliases for SNORA18 Gene

Subcategory (RNA class) for SNORA18 Gene


Quality Score for this RNA gene is


Aliases for SNORA18 Gene

  • Small Nucleolar RNA, H/ACA Box 18 2 3 5
  • ACA18 SnoRNA 3
  • ACA18 3

External Ids for SNORA18 Gene

Previous GeneCards Identifiers for SNORA18 Gene

  • GC11M093142
  • GC11M093150
  • GC11M093157
  • GC11M093163
  • GC11M093169
  • GC11M093179
  • GC11M093188
  • GC11M093199
  • GC11M093470
  • GC11M093476
  • GC11M089544
  • GC11M093484
  • GC11M093500
  • GC11M093508
  • GC11M093516
  • GC11M093526
  • GC11M093542
  • GC11M093566
  • GC11M093737
  • GC11M093749
  • GC11M093760
  • GC11M093770

Summaries for SNORA18 Gene

GeneCards Summary for SNORA18 Gene

SNORA18 (Small Nucleolar RNA, H/ACA Box 18) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA18 Gene

Genomics for SNORA18 Gene

Regulatory Elements for SNORA18 Gene

Enhancers for SNORA18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F093783 0.5 ENCODE 11.3 -51.1 -51134 2.6 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS ZNF548 DEK C11orf54 SNORA1 MED17 MRE11 ANKRD49 ENSG00000255233 ENSG00000233536 ENSG00000254874 SNORA40 SNORA18
GH11F093654 0.6 Ensembl ENCODE 9.9 +78.2 78197 1.6 GATA3 SCRT2 MAX C11orf54 MIR1304 TAF1D SNORA1 SNORA25 SNORA32 SNORD6 MED17 SNORA18 SNORA40
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORA18 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA18 Gene

93,733,466 bp from pter
93,733,597 bp from pter
132 bases
Minus strand

Genomic View for SNORA18 Gene

Genes around SNORA18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA18 Gene

Proteins for SNORA18 Gene

Post-translational modifications for SNORA18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA18 Gene

Domains & Families for SNORA18 Gene

Gene Families for SNORA18 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA18: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA18 Gene

Function for SNORA18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA18 Gene

Localization for SNORA18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA18 Gene

Pathways & Interactions for SNORA18 Gene

SuperPathways for SNORA18 Gene

No Data Available

Interacting Proteins for SNORA18 Gene

Gene Ontology (GO) - Biological Process for SNORA18 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA18 Gene

Transcripts for SNORA18 Gene

mRNA/cDNA for SNORA18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA18 Gene

No ASD Table

Relevant External Links for SNORA18 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA18 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA18 Gene:

genes like me logo Genes that share expression patterns with SNORA18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA18 Gene

Orthologs for SNORA18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA18 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA18 35
  • 99 (a)
(Canis familiaris)
Mammalia SNORA18 35
  • 87 (a)
(Mus musculus)
Mammalia Gm24455 35
  • 87 (a)
(Bos Taurus)
Mammalia SNORA18 35
  • 84 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA18 35
  • 73 (a)
(Monodelphis domestica)
Mammalia SNORA18 35
  • 68 (a)
(Gallus gallus)
Aves SNORA18 35
  • 73 (a)
(Anolis carolinensis)
Reptilia SNORA18 35
  • 67 (a)
(Danio rerio)
Actinopterygii SNORA18 35
  • 64 (a)
Species where no ortholog for SNORA18 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA18 Gene

Gene Tree for SNORA18 (if available)
Gene Tree for SNORA18 (if available)

Paralogs for SNORA18 Gene

No data available for Paralogs for SNORA18 Gene

Variants for SNORA18 Gene

Sequence variations from dbSNP and Humsavar for SNORA18 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1063080 -- 93,734,928(-) AAATT(A/G)GCTGG downstream-variant-500B, upstream-variant-2KB
rs115206477 -- 93,734,089(+) CTTCA(A/G)TATTG upstream-variant-2KB
rs116789819 -- 93,734,702(+) TGAAA(C/T)TGGAA downstream-variant-500B, upstream-variant-2KB
rs116863270 -- 93,735,514(+) AAAAA(A/T)ACAAA intron-variant, upstream-variant-2KB
rs116938419 -- 93,733,912(+) CAACT(C/G)CAGAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORA18 Gene

Variant ID Type Subtype PubMed ID
esv3627294 CNV gain 21293372
nsv832232 CNV gain 17160897

Relevant External Links for SNORA18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA18 Gene

Disorders for SNORA18 Gene

Relevant External Links for SNORA18

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA18 Gene

Publications for SNORA18 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 64
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORA18 Gene

Sources for SNORA18 Gene

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