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Aliases for SNORA15 Gene

Subcategory (RNA class) for SNORA15 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA15 Gene

  • Small Nucleolar RNA, H/ACA Box 15 2 3 5
  • ACA15 SnoRNA 3
  • SNORA15A 3
  • ACA15 3

External Ids for SNORA15 Gene

ORGUL Members for SNORA15 Gene

Previous GeneCards Identifiers for SNORA15 Gene

  • GC07P056095
  • GC07P056128
  • GC07P055941
  • GC07P056062
  • GC07P056065

Summaries for SNORA15 Gene

GeneCards Summary for SNORA15 Gene

SNORA15 (Small Nucleolar RNA, H/ACA Box 15) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA15 Gene

Genomics for SNORA15 Gene

Regulatory Elements for SNORA15 Gene

Genomic Location for SNORA15 Gene

Chromosome:
7
Start:
56,060,470 bp from pter
End:
56,060,602 bp from pter
Size:
133 bases
Orientation:
Plus strand

Genomic View for SNORA15 Gene

Genes around SNORA15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA15 Gene

Proteins for SNORA15 Gene

Post-translational modifications for SNORA15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA15 Gene

Domains & Families for SNORA15 Gene

Gene Families for SNORA15 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA15: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA15 Gene

Function for SNORA15 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA15 Gene

Localization for SNORA15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA15 Gene

Pathways & Interactions for SNORA15 Gene

SuperPathways for SNORA15 Gene

No Data Available

Interacting Proteins for SNORA15 Gene

Gene Ontology (GO) - Biological Process for SNORA15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA15 Gene

Drugs & Compounds for SNORA15 Gene

No Compound Related Data Available

Transcripts for SNORA15 Gene

mRNA/cDNA for SNORA15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA15 Gene

No ASD Table

Relevant External Links for SNORA15 Gene

GeneLoc Exon Structure for
SNORA15
ECgene alternative splicing isoforms for
SNORA15

Expression for SNORA15 Gene

mRNA expression in normal human tissues for SNORA15 Gene

SOURCE GeneReport for Unigene cluster for SNORA15 Gene Hs.689706

genes like me logo Genes that share expression patterns with SNORA15: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA15 Gene

Orthologs for SNORA15 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA15 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORA15 36
  • 84 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA15 36
  • 87 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Snora15 36
  • 83 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA15 36
  • 99 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA15 36
  • 55 (a)
OneToMany
Species with no ortholog for SNORA15:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA15 Gene

ENSEMBL:
Gene Tree for SNORA15 (if available)
TreeFam:
Gene Tree for SNORA15 (if available)

Paralogs for SNORA15 Gene

No data available for Paralogs for SNORA15 Gene

Variants for SNORA15 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA15 Gene

Variant ID Type Subtype PubMed ID
esv28230 CNV Gain+Loss 19812545
esv2734447 CNV Deletion 23290073
dgv1201e199 CNV Deletion 23128226
esv2734448 CNV Deletion 23290073

Relevant External Links for SNORA15 Gene

HapMap Linkage Disequilibrium report
SNORA15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA15 Gene

Disorders for SNORA15 Gene

Relevant External Links for SNORA15

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA15

No disorders were found for SNORA15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA15 Gene

Publications for SNORA15 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 67
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA15 Gene

Sources for SNORA15 Gene

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