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Aliases for SNORA14B Gene

Subcategory (RNA class) for SNORA14B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA14B Gene

  • Small Nucleolar RNA, H/ACA Box 14B 2 3
  • ACA14b SnoRNA 3
  • ACA14b 3

External Ids for SNORA14B Gene

Previous GeneCards Identifiers for SNORA14B Gene

  • GC01M233357
  • GC01M235291
  • GC01M205739

Summaries for SNORA14B Gene

Entrez Gene Summary for SNORA14B Gene

  • Small nucleolar RNAs (snoRNAs) are 60-150 nt long non-coding RNAs, and include two groups: C/D box snoRNAs and H/ACA box snoRNAs. The C/D box snoRNAs are guides for the 2'-O-ribose methylation of rRNAs or snRNAs. The H/ACA box snoRNAs are guides for the isomerization of uridine residues into pseudouridine. This gene belongs to the group of the H/ACA box snoRNAs, and functions in 18S rRNA pseudouridylation at position U966. The gene duplication generates a 91% identical copy on chromosome 7. [provided by RefSeq, Oct 2008]

GeneCards Summary for SNORA14B Gene

SNORA14B (Small Nucleolar RNA, H/ACA Box 14B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA14B Gene

Genomics for SNORA14B Gene

Regulatory Elements for SNORA14B Gene

Genomic Location for SNORA14B Gene

Start:
235,127,803 bp from pter
End:
235,127,937 bp from pter
Size:
135 bases
Orientation:
Minus strand

Genomic View for SNORA14B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA14B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA14B Gene

Proteins for SNORA14B Gene

Post-translational modifications for SNORA14B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA14B Gene

Domains for SNORA14B Gene

Gene Families for SNORA14B Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA14B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA14B Gene

Function for SNORA14B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA14B Gene

Localization for SNORA14B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA14B Gene

Pathways for SNORA14B Gene

SuperPathways for SNORA14B Gene

No Data Available

Interacting Proteins for SNORA14B Gene

Gene Ontology (GO) - Biological Process for SNORA14B Gene

None

No data available for Pathways by source for SNORA14B Gene

Transcripts for SNORA14B Gene

mRNA/cDNA for SNORA14B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA14B

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA14B Gene

No ASD Table

Relevant External Links for SNORA14B Gene

GeneLoc Exon Structure for
SNORA14B
ECgene alternative splicing isoforms for
SNORA14B

Expression for SNORA14B Gene

mRNA expression in normal human tissues for SNORA14B Gene

SOURCE GeneReport for Unigene cluster for SNORA14B Gene Hs.744743

genes like me logo Genes that share expressions with SNORA14B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORA14B Gene

Orthologs for SNORA14B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA14B Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia SNORA14 36
  • 79 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA14 36
  • 57 (a)
ManyToMany
SNORA14 36
  • 72 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA14 36
  • 99 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA14 36
  • 62 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA14 36
  • 63 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA14 36
  • 50 (a)
ManyToMany
SNORA14 36
  • 52 (a)
ManyToMany
Species with no ortholog for SNORA14B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA14B Gene

ENSEMBL:
Gene Tree for SNORA14B (if available)
TreeFam:
Gene Tree for SNORA14B (if available)

Paralogs for SNORA14B Gene

No data available for Paralogs for SNORA14B Gene

Variants for SNORA14B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA14B Gene

Variant ID Type Subtype PubMed ID
nsv508699 CNV Loss 20534489
esv275126 CNV Loss 21479260

Relevant External Links for SNORA14B Gene

HapMap Linkage Disequilibrium report
SNORA14B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA14B Gene

Disorders for SNORA14B Gene

No disorders were found for SNORA14B Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORA14B Gene

Publications for SNORA14B Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA14B Gene

Sources for SNORA14B Gene

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