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Aliases for SNORA14A Gene

Subcategory (RNA class) for SNORA14A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA14A Gene

  • Small Nucleolar RNA, H/ACA Box 14A 2 3
  • ACA14a SnoRNA 3
  • ACA14a 3

External Ids for SNORA14A Gene

Summaries for SNORA14A Gene

Entrez Gene Summary for SNORA14A Gene

  • Small nucleolar RNAs (snoRNAs) are 60-150 nt long non-coding RNAs, and include two groups: C/D box snoRNAs and H/ACA box snoRNAs. The C/D box snoRNAs are guides for the 2'-O-ribose methylation of rRNAs or snRNAs. The H/ACA box snoRNAs are guides for the isomerization of uridine residues into pseudouridine. This gene belongs to the group of the H/ACA box snoRNAs, and functions in 18S rRNA pseudouridylation at position U966. The gene duplication generates a 91% identical copy on chromosome 1. [provided by RefSeq, Oct 2008]

GeneCards Summary for SNORA14A Gene

SNORA14A (Small Nucleolar RNA, H/ACA Box 14A) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA14A Gene

Genomics for SNORA14A Gene

Genomic Location for SNORA14A Gene

Start:
75,943,782 bp from pter
End:
75,943,916 bp from pter
Size:
135 bases
Orientation:
Plus strand

Genomic View for SNORA14A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA14A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA14A Gene

Regulatory Elements for SNORA14A Gene

Proteins for SNORA14A Gene

Post-translational modifications for SNORA14A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA14A Gene

Domains for SNORA14A Gene

Gene Families for SNORA14A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA14A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA14A Gene

Function for SNORA14A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA14A Gene

Localization for SNORA14A Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA14A Gene

Pathways for SNORA14A Gene

SuperPathways for SNORA14A Gene

No Data Available

Interacting Proteins for SNORA14A Gene

Gene Ontology (GO) - Biological Process for SNORA14A Gene

None

No data available for Pathways by source for SNORA14A Gene

Transcripts for SNORA14A Gene

mRNA/cDNA for SNORA14A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA14A Gene

No ASD Table

Relevant External Links for SNORA14A Gene

GeneLoc Exon Structure for
SNORA14A
ECgene alternative splicing isoforms for
SNORA14A

Expression for SNORA14A Gene

mRNA expression in normal human tissues for SNORA14A Gene

SOURCE GeneReport for Unigene cluster for SNORA14A Gene Hs.689708

genes like me logo Genes that share expressions with SNORA14A: view

Orthologs for SNORA14A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA14A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA14 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA14 37
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA14 37
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26397 37
  • 86 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA14 37
  • 75 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA14 37
  • 58 (a)
ManyToMany
SNORA14 37
  • 70 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA14 37
  • 65 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA14 37
  • 62 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA14 37
  • 50 (a)
ManyToMany
SNORA14 37
  • 52 (a)
ManyToMany
Species with no ortholog for SNORA14A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA14A Gene

ENSEMBL:
Gene Tree for SNORA14A (if available)
TreeFam:
Gene Tree for SNORA14A (if available)

Paralogs for SNORA14A Gene

No data available for Paralogs for SNORA14A Gene

Variants for SNORA14A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA14A Gene

Variant ID Type Subtype PubMed ID
nsv528969 CNV Gain 19592680
essv14753 CNV CNV 17122850
dgv120n16 CNV Deletion 17901297
dgv2103e1 CNV Complex 17122850
nsv428173 CNV Gain 18775914
dgv2104e1 CNV Complex 17122850

Relevant External Links for SNORA14A Gene

HapMap Linkage Disequilibrium report
SNORA14A

No data available for Sequence variations from dbSNP and Humsavar for SNORA14A Gene

Disorders for SNORA14A Gene

No disorders were found for SNORA14A Gene.

No data available for UniProtKB/Swiss-Prot for SNORA14A Gene

Publications for SNORA14A Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA14A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA14A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA14A
    • Block miRNA regulation of SNORA14A using miScript Target Protectors

    Sources for SNORA14A Gene

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