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Aliases for SNORA11E Gene

Subcategory (RNA class) for SNORA11E Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA11E Gene

  • Small Nucleolar RNA, H/ACA Box 11E 2 3

External Ids for SNORA11E Gene

ORGUL Members for SNORA11E Gene

Summaries for SNORA11E Gene

GeneCards Summary for SNORA11E Gene

SNORA11E (Small Nucleolar RNA, H/ACA Box 11E) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA11E Gene

Genomics for SNORA11E Gene

Genomic Location for SNORA11E Gene

Start:
52,063,347 bp from pter
End:
52,063,474 bp from pter
Size:
128 bases
Orientation:
Minus strand

Genomic View for SNORA11E Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA11E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA11E Gene

Regulatory Elements for SNORA11E Gene

Proteins for SNORA11E Gene

Post-translational modifications for SNORA11E Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA11E Gene

Domains for SNORA11E Gene

Gene Families for SNORA11E Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA11E: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA11E Gene

Function for SNORA11E Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA11E Gene

Localization for SNORA11E Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA11E Gene

Pathways for SNORA11E Gene

SuperPathways for SNORA11E Gene

No Data Available

Interacting Proteins for SNORA11E Gene

Gene Ontology (GO) - Biological Process for SNORA11E Gene

None

No data available for Pathways by source for SNORA11E Gene

Transcripts for SNORA11E Gene

mRNA/cDNA for SNORA11E Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA11E Gene

No ASD Table

Relevant External Links for SNORA11E Gene

GeneLoc Exon Structure for
SNORA11E
ECgene alternative splicing isoforms for
SNORA11E

Expression for SNORA11E Gene

mRNA expression in normal human tissues for SNORA11E Gene

genes like me logo Genes that share expressions with SNORA11E: view

Orthologs for SNORA11E Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA11E Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA11 37
  • 99 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORA11 37
  • 83 (a)
ManyToMany
SNORA11 37
  • 80 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22488 37
  • 81 (a)
OneToMany
Species with no ortholog for SNORA11E:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA11E Gene

ENSEMBL:
Gene Tree for SNORA11E (if available)
TreeFam:
Gene Tree for SNORA11E (if available)

Paralogs for SNORA11E Gene

No data available for Paralogs for SNORA11E Gene

Variants for SNORA11E Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA11E Gene

Variant ID Type Subtype PubMed ID
nsv516643 CNV Gain 19592680

Relevant External Links for SNORA11E Gene

HapMap Linkage Disequilibrium report
SNORA11E

No data available for Sequence variations from dbSNP and Humsavar for SNORA11E Gene

Disorders for SNORA11E Gene

No disorders were found for SNORA11E Gene.

No data available for UniProtKB/Swiss-Prot for SNORA11E Gene

Publications for SNORA11E Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA11E Gene

Sources for SNORA11E Gene

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