Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORA11B Gene

Subcategory (RNA class) for SNORA11B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA11B Gene

  • Small Nucleolar RNA, H/ACA Box 11B 2 3
  • Small Nucleolar RNA, H/ACA Box 11B (Retrotransposed) 2

External Ids for SNORA11B Gene

ORGUL Members for SNORA11B Gene

Previous GeneCards Identifiers for SNORA11B Gene

  • GC14U900763
  • GC14P090663
  • GC14P091592
  • GC14P071768

Summaries for SNORA11B Gene

GeneCards Summary for SNORA11B Gene

SNORA11B (Small Nucleolar RNA, H/ACA Box 11B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA11B Gene

Genomics for SNORA11B Gene

Regulatory Elements for SNORA11B Gene

Genomic Location for SNORA11B Gene

Start:
91,126,425 bp from pter
End:
91,126,553 bp from pter
Size:
129 bases
Orientation:
Plus strand

Genomic View for SNORA11B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA11B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA11B Gene

Proteins for SNORA11B Gene

Post-translational modifications for SNORA11B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA11B Gene

Domains for SNORA11B Gene

Gene Families for SNORA11B Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA11B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA11B Gene

Function for SNORA11B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA11B Gene

Localization for SNORA11B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA11B Gene

Pathways for SNORA11B Gene

SuperPathways for SNORA11B Gene

No Data Available

Interacting Proteins for SNORA11B Gene

Gene Ontology (GO) - Biological Process for SNORA11B Gene

None

No data available for Pathways by source for SNORA11B Gene

Transcripts for SNORA11B Gene

mRNA/cDNA for SNORA11B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA11B Gene

No ASD Table

Relevant External Links for SNORA11B Gene

GeneLoc Exon Structure for
SNORA11B
ECgene alternative splicing isoforms for
SNORA11B

Expression for SNORA11B Gene

mRNA expression in normal human tissues for SNORA11B Gene

SOURCE GeneReport for Unigene cluster for SNORA11B Gene Hs.693444

genes like me logo Genes that share expressions with SNORA11B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA11B Gene

Orthologs for SNORA11B Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA11B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA11 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA11 36
  • 82 (a)
ManyToMany
SNORA11 36
  • 82 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22488 36
  • 78 (a)
OneToMany
Species with no ortholog for SNORA11B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA11B Gene

ENSEMBL:
Gene Tree for SNORA11B (if available)
TreeFam:
Gene Tree for SNORA11B (if available)

Paralogs for SNORA11B Gene

No data available for Paralogs for SNORA11B Gene

Variants for SNORA11B Gene

Relevant External Links for SNORA11B Gene

HapMap Linkage Disequilibrium report
SNORA11B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SNORA11B Gene

Disorders for SNORA11B Gene

No disorders were found for SNORA11B Gene.

No data available for UniProtKB/Swiss-Prot for SNORA11B Gene

Publications for SNORA11B Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA11B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA11B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA11B
    • Block miRNA regulation of SNORA11B using miScript Target Protectors

    Sources for SNORA11B Gene

    Back to Top

    Content