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Aliases for SNHG8 Gene

Subcategory (RNA class) for SNHG8 Gene


Quality Score for this RNA gene is


Aliases for SNHG8 Gene

  • Small Nucleolar RNA Host Gene 8 2 3 5
  • Small Nucleolar RNA Host Gene 8 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 60 2 3
  • Small Nucleolar RNA Host Gene (Non-Protein Coding) 8 3
  • Non-Protein Coding RNA 60 2
  • NCRNA00060 3
  • LINC00060 3

External Ids for SNHG8 Gene

ORGUL Members for SNHG8 Gene

Previous GeneCards Identifiers for SNHG8 Gene

  • GC03P052543
  • GC04U900695
  • GC04P119420
  • GC04P119199
  • GC04P114935

Summaries for SNHG8 Gene

GeneCards Summary for SNHG8 Gene

SNHG8 (Small Nucleolar RNA Host Gene 8) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SNHG8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNHG8 Gene

Genomics for SNHG8 Gene

Regulatory Elements for SNHG8 Gene

Enhancers for SNHG8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H118275 1.4 Ensembl ENCODE 57.2 +0.8 792 7.7 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SNHG8 METTL14 FKBP4P1 LINC02264 LINC02262 CICP16 CEP170P1 LOC729218 SNORA24 PRSS12
GH04H118265 0.6 Ensembl ENCODE 57.7 -13.0 -13009 1 NFYC SNHG8 FKBP4P1 LOC105377392 PIR50208
GH04H118224 0.7 dbSUPER 33.1 -53.5 -53535 1.5 CTCF ZNF654 FOXA2 TRIM22 REST RAD21 ZNF316 MAFF SMC3 EMSY SNHG8 FKBP4P1 METTL14 NDST3 PIR50208 LOC105377392
GH04H119102 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +824.7 824721 2.8 FOXA2 ATF1 SIN3A FEZF1 FOS ATF7 SP3 ZNF518A MAFF STAT3 METTL14 CICP16 USP53 MYOZ2 SNHG8 FABP2 LOC102723967 GC04P119115
GH04H118285 0.6 ENCODE 28.4 +10.0 10048 5.8 JUND POLR2A FOS HNF4A ATF2 MAFK SNHG8 PRSS12 CICP16 SNORA24
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNHG8 on UCSC Golden Path with GeneCards custom track

Promoters for SNHG8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for SNHG8 Gene

Genomic Locations for SNHG8 Gene
1,115 bases
Plus strand

Genomic View for SNHG8 Gene

Genes around SNHG8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNHG8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNHG8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNHG8 Gene

Proteins for SNHG8 Gene

Post-translational modifications for SNHG8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNHG8 Gene

Domains & Families for SNHG8 Gene

Gene Families for SNHG8 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNHG8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNHG8 Gene

Function for SNHG8 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNHG8 Gene

Localization for SNHG8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNHG8 Gene

Pathways & Interactions for SNHG8 Gene

SuperPathways for SNHG8 Gene

No Data Available

Interacting Proteins for SNHG8 Gene

Gene Ontology (GO) - Biological Process for SNHG8 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNHG8 Gene

Drugs & Compounds for SNHG8 Gene

No Compound Related Data Available

Transcripts for SNHG8 Gene

mRNA/cDNA for SNHG8 Gene

(5) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNHG8 Gene

Small nucleolar RNA host gene 8 (non-protein coding):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNHG8 Gene

No ASD Table

Relevant External Links for SNHG8 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNHG8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNHG8 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNHG8 Gene:


SOURCE GeneReport for Unigene cluster for SNHG8 Gene:

genes like me logo Genes that share expression patterns with SNHG8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNHG8 Gene

Orthologs for SNHG8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNHG8 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA24 34
  • 100 (a)
(Canis familiaris)
Mammalia SNORA24 34
  • 98 (a)
(Monodelphis domestica)
Mammalia SNORA24 34
  • 91 (a)
(Bos Taurus)
Mammalia SNORA24 34
  • 87 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA24 34 34 34 34
  • 82 (a)
(Mus musculus)
Mammalia Gm24918 34
  • 79 (a)
(Gallus gallus)
Aves SNORA24 34
  • 73 (a)
(Anolis carolinensis)
Reptilia SNORA24 34
  • 69 (a)
Species where no ortholog for SNHG8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNHG8 Gene

Gene Tree for SNHG8 (if available)
Gene Tree for SNHG8 (if available)

Paralogs for SNHG8 Gene

No data available for Paralogs for SNHG8 Gene

Variants for SNHG8 Gene

Sequence variations from dbSNP and Humsavar for SNHG8 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs150249635 Uncertain significance 118,280,321(+) CCCTT(A/G)TGCAA intron-variant, utr-variant-3-prime
rs183712097 Uncertain significance 118,280,071(+) ACACA(A/G)ATATG intron-variant, utr-variant-3-prime
rs372099887 Uncertain significance 118,280,276(+) TTTCA(A/G)TAGAC intron-variant, utr-variant-3-prime
rs886059024 Uncertain significance 118,280,237(-) ACTAG(C/T)GTTGG downstream-variant-500B, utr-variant-3-prime
rs1002255922 -- 118,278,386(+) AGACG(G/T)GAGCC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNHG8 Gene

Variant ID Type Subtype PubMed ID
nsv519017 CNV loss 19592680
nsv1002771 CNV gain 25217958
esv3894015 CNV gain 25118596
esv34354 CNV gain 17911159
esv34038 CNV loss 18971310
esv2759279 CNV gain 17122850
dgv5372n100 CNV loss 25217958

Relevant External Links for SNHG8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNHG8 Gene

Disorders for SNHG8 Gene

Relevant External Links for SNHG8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNHG8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNHG8 Gene

Publications for SNHG8 Gene

  1. SNHG8 is identified as a key regulator of epstein-barr virus(EBV)-associated gastric cancer by an integrative analysis of lncRNA and mRNA expression. (PMID: 27835598) Huang T … Lin X (Oncotarget 2016) 2 3 60
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 2 3 60
  3. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for SNHG8 Gene

Sources for SNHG8 Gene

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