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Aliases for SNHG4 Gene

Subcategory (RNA class) for SNHG4 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNHG4 Gene

  • Small Nucleolar RNA Host Gene 4 2 3
  • Small Nucleolar RNA Host Gene 4 (Non-Protein Coding) 2 3
  • Small Nucleolar RNA Host Gene (Non-Protein Coding) 4 3
  • Non-Protein Coding RNA 59 2
  • NCRNA00059 3
  • U19 Host 3
  • U19H 3

External Ids for SNHG4 Gene

Previous GeneCards Identifiers for SNHG4 Gene

  • GC05U900619
  • GC05P138610

Summaries for SNHG4 Gene

GeneCards Summary for SNHG4 Gene

SNHG4 (Small Nucleolar RNA Host Gene 4) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNHG4 Gene

Genomics for SNHG4 Gene

Regulatory Elements for SNHG4 Gene

Genomic Location for SNHG4 Gene

Chromosome:
5
Start:
139,273,752 bp from pter
End:
139,283,244 bp from pter
Size:
9,493 bases
Orientation:
Plus strand

Genomic View for SNHG4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SNHG4 Gene

Proteins for SNHG4 Gene

Post-translational modifications for SNHG4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNHG4 Gene

Domains & Families for SNHG4 Gene

Gene Families for SNHG4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNHG4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNHG4 Gene

Function for SNHG4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNHG4 Gene

Localization for SNHG4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNHG4 Gene

Pathways & Interactions for SNHG4 Gene

SuperPathways for SNHG4 Gene

No Data Available

Interacting Proteins for SNHG4 Gene

Gene Ontology (GO) - Biological Process for SNHG4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNHG4 Gene

Drugs & Compounds for SNHG4 Gene

No Compound Related Data Available

Transcripts for SNHG4 Gene

mRNA/cDNA for SNHG4 Gene

(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNHG4 Gene

No ASD Table

Relevant External Links for SNHG4 Gene

GeneLoc Exon Structure for
SNHG4
ECgene alternative splicing isoforms for
SNHG4

Expression for SNHG4 Gene

mRNA expression in normal human tissues for SNHG4 Gene

genes like me logo Genes that share expression patterns with SNHG4: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNHG4 Gene

Orthologs for SNHG4 Gene

Evolution for SNHG4 Gene

ENSEMBL:
Gene Tree for SNHG4 (if available)
TreeFam:
Gene Tree for SNHG4 (if available)

No data available for Orthologs for SNHG4 Gene

Paralogs for SNHG4 Gene

No data available for Paralogs for SNHG4 Gene

Variants for SNHG4 Gene

Relevant External Links for SNHG4 Gene

HapMap Linkage Disequilibrium report
SNHG4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNHG4 Gene

Disorders for SNHG4 Gene

Relevant External Links for SNHG4

Genetic Association Database (GAD)
SNHG4
Human Genome Epidemiology (HuGE) Navigator
SNHG4
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNHG4
genes like me logo Genes that share disorders with SNHG4: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNHG4 Gene

Publications for SNHG4 Gene

  1. Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding. (PMID: 9630250) Bortolin M.L. … Kiss T. (RNA 1998) 2 67
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 67
  3. Integrated genomic analysis implicates haploinsufficiency of multiple chromosome 5q31.2 genes in de novo myelodysplastic syndromes pathogenesis. (PMID: 19240791) Graubert T.A. … Walter M.J. (PLoS ONE 2009) 67
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 67
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 67

Products for SNHG4 Gene

Sources for SNHG4 Gene

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