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Aliases for SNHG22 Gene

Subcategory (RNA class) for SNHG22 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNHG22 Gene

  • Small Nucleolar RNA Host Gene 22 2 3 5
  • Small Nucleolar RNA Host Gene 22 (Non-Protein Coding) 2 3
  • SCARNA17HG 3
  • SCARNA17 3

External Ids for SNHG22 Gene

Previous GeneCards Identifiers for SNHG22 Gene

  • GC18U900813

Summaries for SNHG22 Gene

GeneCards Summary for SNHG22 Gene

SNHG22 (Small Nucleolar RNA Host Gene 22) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNHG22 Gene

Genomics for SNHG22 Gene

Genomic Location for SNHG22 Gene

Chromosome:
18
Start:
49,814,023 bp from pter
End:
49,851,059 bp from pter
Size:
37,037 bases
Orientation:
Plus strand

Genomic View for SNHG22 Gene

Genes around SNHG22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNHG22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNHG22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNHG22 Gene

No data available for Regulatory Elements for SNHG22 Gene

Proteins for SNHG22 Gene

Post-translational modifications for SNHG22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNHG22 Gene

Domains & Families for SNHG22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNHG22 Gene

Function for SNHG22 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNHG22 Gene

Localization for SNHG22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNHG22 Gene

Pathways & Interactions for SNHG22 Gene

SuperPathways for SNHG22 Gene

No Data Available

Interacting Proteins for SNHG22 Gene

Gene Ontology (GO) - Biological Process for SNHG22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNHG22 Gene

Drugs & Compounds for SNHG22 Gene

No Compound Related Data Available

Transcripts for SNHG22 Gene

mRNA/cDNA for SNHG22 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNHG22 Gene

No ASD Table

Relevant External Links for SNHG22 Gene

GeneLoc Exon Structure for
SNHG22
ECgene alternative splicing isoforms for
SNHG22

Expression for SNHG22 Gene

mRNA expression in normal human tissues for SNHG22 Gene

genes like me logo Genes that share expression patterns with SNHG22: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNHG22 Gene

Orthologs for SNHG22 Gene

Evolution for SNHG22 Gene

ENSEMBL:
Gene Tree for SNHG22 (if available)
TreeFam:
Gene Tree for SNHG22 (if available)

No data available for Orthologs for SNHG22 Gene

Paralogs for SNHG22 Gene

No data available for Paralogs for SNHG22 Gene

Variants for SNHG22 Gene

Sequence variations from dbSNP and Humsavar for SNHG22 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1557360 -- 49,818,186(-) CTACA(C/T)TCCCT intron-variant
rs1787535 -- 49,821,023(-) tatac(A/T)tttga intron-variant
rs1942417 -- 49,818,355(+) TATAT(A/C)TTTGG intron-variant
rs8089353 -- 49,819,733(+) gttac(A/G)tggtt intron-variant
rs8182420 -- 49,817,389(+) CTTCA(A/G)TTTTT intron-variant

Relevant External Links for SNHG22 Gene

HapMap Linkage Disequilibrium report
SNHG22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNHG22 Gene

Disorders for SNHG22 Gene

Relevant External Links for SNHG22

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNHG22

No disorders were found for SNHG22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNHG22 Gene

Publications for SNHG22 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for SNHG22 Gene

Sources for SNHG22 Gene

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