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Aliases for SNHG20 Gene

Subcategory (RNA class) for SNHG20 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNHG20 Gene

  • Small Nucleolar RNA Host Gene 20 2 3 5
  • Small Nucleolar RNA Host Gene 20 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 338 2 3
  • Chromosome 17 Open Reading Frame 86 2
  • Non-Protein Coding RNA 338 2
  • SCARNA16HG 3
  • NCRNA00338 3
  • LINC00338 3
  • C17orf86 3

External Ids for SNHG20 Gene

Previous HGNC Symbols for SNHG20 Gene

  • C17orf86
  • NCRNA00338
  • LINC00338

Previous GeneCards Identifiers for SNHG20 Gene

  • GC17P075102

Summaries for SNHG20 Gene

GeneCards Summary for SNHG20 Gene

SNHG20 (Small Nucleolar RNA Host Gene 20) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNHG20 Gene

Genomics for SNHG20 Gene

Regulatory Elements for SNHG20 Gene

Enhancers for SNHG20 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SNHG20 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNHG20 Gene

Chromosome:
17
Start:
77,086,716 bp from pter
End:
77,094,990 bp from pter
Size:
8,275 bases
Orientation:
Plus strand

Genomic View for SNHG20 Gene

Genes around SNHG20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNHG20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNHG20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNHG20 Gene

Proteins for SNHG20 Gene

Post-translational modifications for SNHG20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNHG20 Gene

Domains & Families for SNHG20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNHG20 Gene

Function for SNHG20 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNHG20 Gene

Localization for SNHG20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNHG20 Gene

Pathways & Interactions for SNHG20 Gene

SuperPathways for SNHG20 Gene

No Data Available

Interacting Proteins for SNHG20 Gene

Gene Ontology (GO) - Biological Process for SNHG20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNHG20 Gene

Drugs & Compounds for SNHG20 Gene

No Compound Related Data Available

Transcripts for SNHG20 Gene

mRNA/cDNA for SNHG20 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNHG20 Gene

No ASD Table

Relevant External Links for SNHG20 Gene

GeneLoc Exon Structure for
SNHG20
ECgene alternative splicing isoforms for
SNHG20

Expression for SNHG20 Gene

mRNA expression in normal human tissues for SNHG20 Gene

genes like me logo Genes that share expression patterns with SNHG20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNHG20 Gene

Orthologs for SNHG20 Gene

Evolution for SNHG20 Gene

ENSEMBL:
Gene Tree for SNHG20 (if available)
TreeFam:
Gene Tree for SNHG20 (if available)

No data available for Orthologs for SNHG20 Gene

Paralogs for SNHG20 Gene

No data available for Paralogs for SNHG20 Gene

Variants for SNHG20 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for SNHG20 Gene

Disorders for SNHG20 Gene

Relevant External Links for SNHG20

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNHG20

No disorders were found for SNHG20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNHG20 Gene

Publications for SNHG20 Gene

  1. A computational screen for mammalian pseudouridylation guide H/ACA RNAs. (PMID: 16373490) Schattner P. … Lowe T.M. (RNA 2006) 2 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for SNHG20 Gene

Sources for SNHG20 Gene

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