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Aliases for SNHG16 Gene

Subcategory (RNA class) for SNHG16 Gene


Quality Score for this RNA gene is


Aliases for SNHG16 Gene

  • Small Nucleolar RNA Host Gene 16 2 3
  • Small Nucleolar RNA Host Gene 16 (Non-Protein Coding) 2 3
  • Non-Coding RNA Expressed In Aggressive Neuroblastoma 2 3
  • NcRAN 3

External Ids for SNHG16 Gene

ORGUL Members for SNHG16 Gene

Previous GeneCards Identifiers for SNHG16 Gene

  • GC17P074570
  • GC17P074578
  • GC17P074592
  • GC17P074604

Summaries for SNHG16 Gene

GeneCards Summary for SNHG16 Gene

SNHG16 (Small Nucleolar RNA Host Gene 16) is an RNA Gene, and is affiliated with the antisense RNA class. Diseases associated with SNHG16 include neuroblastoma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNHG16 Gene

Genomics for SNHG16 Gene

Genomic Location for SNHG16 Gene

76,557,764 bp from pter
76,565,348 bp from pter
7,585 bases
Plus strand

Genomic View for SNHG16 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNHG16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNHG16 Gene

No data available for Regulatory Elements for SNHG16 Gene

Proteins for SNHG16 Gene

Post-translational modifications for SNHG16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNHG16 Gene

Domains for SNHG16 Gene

Gene Families for SNHG16 Gene

  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNHG16: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNHG16 Gene

Function for SNHG16 Gene

miRNA for SNHG16 Gene

miRTarBase miRNAs that target SNHG16

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SNHG16 Gene

Localization for SNHG16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNHG16 Gene

Pathways for SNHG16 Gene

SuperPathways for SNHG16 Gene

No Data Available

Interacting Proteins for SNHG16 Gene

Gene Ontology (GO) - Biological Process for SNHG16 Gene


No data available for Pathways by source for SNHG16 Gene

Transcripts for SNHG16 Gene

mRNA/cDNA for SNHG16 Gene

(18) Additional mRNA sequences :
(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNHG16 Gene

Small nucleolar RNA host gene 16 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNHG16 Gene

No ASD Table

Relevant External Links for SNHG16 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNHG16 Gene

mRNA expression in normal human tissues for SNHG16 Gene

SOURCE GeneReport for Unigene cluster for SNHG16 Gene Hs.288215

genes like me logo Genes that share expressions with SNHG16: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNHG16 Gene

Orthologs for SNHG16 Gene

Evolution for SNHG16 Gene

Gene Tree for SNHG16 (if available)
Gene Tree for SNHG16 (if available)

No data available for Orthologs for SNHG16 Gene

Paralogs for SNHG16 Gene Pseudogenes for SNHG16 Gene

genes like me logo Genes that share paralogs with SNHG16: view

No data available for Paralogs for SNHG16 Gene

Variants for SNHG16 Gene

Sequence variations from dbSNP and Humsavar for SNHG16 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs9399 -- 76,564,806(-) TCTAT(G/T)ATAGC nc-transcript-variant
rs10341 -- 76,564,667(-) aaaga(A/G)gttta nc-transcript-variant
rs11181 -- 76,564,871(+) TCCTC(A/C/G)TGCCA nc-transcript-variant
rs1132648 -- 76,564,478(+) tgtta(C/T)cctgg nc-transcript-variant
rs1132652 -- 76,564,646(+) CATGT(A/G)GAACT nc-transcript-variant

Relevant External Links for SNHG16 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SNHG16 Gene

Disorders for SNHG16 Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for SNHG16 Gene in MalaCards »

(1) Diseases for SNHG16 Gene including...

genes like me logo Genes that share disorders with SNHG16: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNHG16 Gene

Publications for SNHG16 Gene

  1. High expression of ncRAN, a novel non-coding RNA mapped to chromosome 17q25.1, is associated with poor prognosis in neuroblastoma. (PMID: 19287950) Yu M. … Nakagawara A. (Int. J. Oncol. 2009) 2 3
  2. ncRAN, a newly identified long noncoding RNA, enhances human bladder tumor growth, invasion, and survival. (PMID: 21147498) Zhu Y. … Li Z. (Urology 2011) 2 3
  3. Down-regulation of ncRAN, a long non-coding RNA, contributes to colorectal cancer cell migration and invasion and predicts poor overall survival for colorectal cancer patients. (PMID: 24519959) Qi P. … Du X. (Mol. Carcinog. 2014) 2 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SNHG16 Gene

Sources for SNHG16 Gene

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