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Aliases for SNAR-H Gene

Subcategory (RNA class) for SNAR-H Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-H Gene

  • Small ILF3/NF90-Associated RNA H 2 3
  • Small ILF3/NF90-Associated RNA 2 2 3
  • SnaR-2 3

External Ids for SNAR-H Gene

Previous GeneCards Identifiers for SNAR-H Gene

  • GC02U901249
  • GC02M078182

Summaries for SNAR-H Gene

GeneCards Summary for SNAR-H Gene

SNAR-H (Small ILF3/NF90-Associated RNA H) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-H Gene

Genomics for SNAR-H Gene

Regulatory Elements for SNAR-H Gene


Genomic Location for SNAR-H Gene

Chromosome:
2
Start:
77,954,907 bp from pter
End:
77,955,026 bp from pter
Size:
120 bases
Orientation:
Minus strand

Genomic View for SNAR-H Gene

Genes around SNAR-H on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-H Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-H Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-H Gene

Proteins for SNAR-H Gene

Post-translational modifications for SNAR-H Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-H Gene

Domains & Families for SNAR-H Gene

Gene Families for SNAR-H Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-H: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-H Gene

Function for SNAR-H Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-H Gene

Localization for SNAR-H Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-H Gene

Pathways & Interactions for SNAR-H Gene

SuperPathways for SNAR-H Gene

No Data Available

Interacting Proteins for SNAR-H Gene

Gene Ontology (GO) - Biological Process for SNAR-H Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNAR-H Gene

Drugs & Compounds for SNAR-H Gene

No Compound Related Data Available

Transcripts for SNAR-H Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-H Gene

No ASD Table

Relevant External Links for SNAR-H Gene

GeneLoc Exon Structure for
SNAR-H
ECgene alternative splicing isoforms for
SNAR-H

No data available for mRNA/cDNA for SNAR-H Gene

Expression for SNAR-H Gene

SOURCE GeneReport for Unigene cluster for SNAR-H Gene:

Hs.717311
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNAR-H Gene

Orthologs for SNAR-H Gene

No data available for Orthologs and Evolution for SNAR-H Gene

Paralogs for SNAR-H Gene

No data available for Paralogs for SNAR-H Gene

Variants for SNAR-H Gene

Sequence variations from dbSNP and Humsavar for SNAR-H Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1002043834 -- 77,956,032(+) AAAAG(G/T)AATCC intron-variant, upstream-variant-2KB
rs1004345187 -- 77,956,761(+) GTCCA(A/G)TGTCA intron-variant, upstream-variant-2KB
rs1004750636 -- 77,955,962(+) GAAAT(C/T)TAAAA intron-variant, upstream-variant-2KB
rs1005438274 -- 77,954,563(+) AGGGG(C/T)GAGAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1006110569 -- 77,956,493(+) TAATA(C/G)TCAGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-H Gene

Variant ID Type Subtype PubMed ID
esv2759068 CNV loss 17122850
nsv1003010 CNV gain 25217958
nsv1010580 CNV loss 25217958
nsv961423 CNV duplication 23825009

Relevant External Links for SNAR-H Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNAR-H

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-H Gene

Disorders for SNAR-H Gene

Relevant External Links for SNAR-H

Genetic Association Database (GAD)
SNAR-H
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNAR-H

No disorders were found for SNAR-H Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-H Gene

Publications for SNAR-H Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3 64
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  3. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta K.L. … Murabito J.M. (BMC Med. Genet. 2007) 46 64

Products for SNAR-H Gene

Sources for SNAR-H Gene

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