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Aliases for SNAR-G1 Gene

Subcategory (RNA class) for SNAR-G1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-G1 Gene

  • Small ILF3/NF90-Associated RNA G1 2 3
  • Small Nuclear ILF3/NF90-Associated RNA G1 2

External Ids for SNAR-G1 Gene

Summaries for SNAR-G1 Gene

GeneCards Summary for SNAR-G1 Gene

SNAR-G1 (Small ILF3/NF90-Associated RNA G1) is an RNA Gene, and belongs to the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-G1 Gene

Genomics for SNAR-G1 Gene

Genomic Location for SNAR-G1 Gene

Start:
49,037,020 bp from pter
End:
49,037,147 bp from pter
Size:
128 bases
Orientation:
Plus strand

Genomic View for SNAR-G1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNAR-G1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-G1 Gene

Regulatory Elements for SNAR-G1 Gene

Proteins for SNAR-G1 Gene

Post-translational modifications for SNAR-G1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-G1 Gene

Domains for SNAR-G1 Gene

Gene Families for SNAR-G1 Gene

HGNC:
  • snRNA :ncRNAs / Small nuclear RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-G1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-G1 Gene

Function for SNAR-G1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNAR-G1 Gene

Localization for SNAR-G1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-G1 Gene

Pathways for SNAR-G1 Gene

SuperPathways for SNAR-G1 Gene

No Data Available

Interacting Proteins for SNAR-G1 Gene

Gene Ontology (GO) - Biological Process for SNAR-G1 Gene

None

No data available for Pathways by source for SNAR-G1 Gene

Transcripts for SNAR-G1 Gene

mRNA/cDNA for SNAR-G1 Gene

(1) Additional mRNA sequences :

Unigene Clusters for SNAR-G1 Gene

Small ILF3/NF90-associated RNA G1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-G1 Gene

No ASD Table

Relevant External Links for SNAR-G1 Gene

GeneLoc Exon Structure for
SNAR-G1
ECgene alternative splicing isoforms for
SNAR-G1

Expression for SNAR-G1 Gene

SOURCE GeneReport for Unigene cluster for SNAR-G1 Gene Hs.621635

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNAR-G1 Gene

Orthologs for SNAR-G1 Gene

No data available for Orthologs and Evolution for SNAR-G1 Gene

Paralogs for SNAR-G1 Gene

No data available for Paralogs for SNAR-G1 Gene

Variants for SNAR-G1 Gene

Sequence variations from dbSNP and Humsavar for SNAR-G1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs56377835 -- 49,035,043(+) GTCTC(A/G)AAGTC upstream-variant-2KB
rs572549701 -- 49,035,033(+) GGCCA(C/G)GCTGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-G1 Gene

Variant ID Type Subtype PubMed ID
nsv9739 CNV Gain+Loss 18304495
nsv833857 CNV Loss 17160897
nsv912248 CNV Loss 21882294
dgv3970n71 CNV Loss 21882294
nsv833859 CNV Loss 17160897
nsv912251 CNV Loss 21882294
esv22462 CNV Gain 19812545
nsv912252 CNV Loss 21882294
dgv592n67 CNV Loss 20364138
esv2718698 CNV Deletion 23290073

Relevant External Links for SNAR-G1 Gene

HapMap Linkage Disequilibrium report
SNAR-G1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SNAR-G1 Gene

Disorders for SNAR-G1 Gene

No disorders were found for SNAR-G1 Gene.

No data available for UniProtKB/Swiss-Prot for SNAR-G1 Gene

Publications for SNAR-G1 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3

Products for SNAR-G1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNAR-G1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNAR-G1
    • Block miRNA regulation of SNAR-G1 using miScript Target Protectors

    Sources for SNAR-G1 Gene

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