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Aliases for SNAR-F Gene

Subcategory (RNA class) for SNAR-F Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-F Gene

  • Small ILF3/NF90-Associated RNA F 2 3
  • Small Nuclear ILF3/NF90-Associated RNA F 2

External Ids for SNAR-F Gene

Previous GeneCards Identifiers for SNAR-F Gene

  • GC19U900755
  • GC19P051108

Summaries for SNAR-F Gene

GeneCards Summary for SNAR-F Gene

SNAR-F (Small ILF3/NF90-Associated RNA F) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-F Gene

Genomics for SNAR-F Gene

Regulatory Elements for SNAR-F Gene

Genomic Location for SNAR-F Gene

Chromosome:
19
Start:
50,604,963 bp from pter
End:
50,605,085 bp from pter
Size:
123 bases
Orientation:
Plus strand

Genomic View for SNAR-F Gene

Genes around SNAR-F on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-F Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-F Gene

Proteins for SNAR-F Gene

Post-translational modifications for SNAR-F Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-F Gene

Domains & Families for SNAR-F Gene

Gene Families for SNAR-F Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-F: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-F Gene

Function for SNAR-F Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-F Gene

Localization for SNAR-F Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-F Gene

Pathways & Interactions for SNAR-F Gene

SuperPathways for SNAR-F Gene

No Data Available

Interacting Proteins for SNAR-F Gene

Gene Ontology (GO) - Biological Process for SNAR-F Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNAR-F Gene

Drugs & Compounds for SNAR-F Gene

No Compound Related Data Available

Transcripts for SNAR-F Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-F Gene

No ASD Table

Relevant External Links for SNAR-F Gene

GeneLoc Exon Structure for
SNAR-F
ECgene alternative splicing isoforms for
SNAR-F

No data available for mRNA/cDNA for SNAR-F Gene

Expression for SNAR-F Gene

SOURCE GeneReport for Unigene cluster for SNAR-F Gene Hs.707968

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNAR-F Gene

Orthologs for SNAR-F Gene

No data available for Orthologs and Evolution for SNAR-F Gene

Paralogs for SNAR-F Gene

No data available for Paralogs for SNAR-F Gene

Variants for SNAR-F Gene

Sequence variations from dbSNP and Humsavar for SNAR-F Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs2914426 -- 50,604,299(+) AGGTG(C/T)GCGCG upstream-variant-2KB
rs6509489 -- 50,603,164(+) TCTTC(C/T)TCCTT upstream-variant-2KB
rs9749326 -- 50,603,254(+) Ttttt(C/T)ttttt upstream-variant-2KB
rs11882253 -- 50,603,521(+) CTTCC(A/G)GCATC upstream-variant-2KB
rs12974092 -- 50,604,761(+) GGACG(C/T)GGCAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-F Gene

Variant ID Type Subtype PubMed ID
nsv512587 CNV Loss 21212237
esv25869 CNV Loss 19812545

Relevant External Links for SNAR-F Gene

HapMap Linkage Disequilibrium report
SNAR-F

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-F Gene

Disorders for SNAR-F Gene

Relevant External Links for SNAR-F

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNAR-F

No disorders were found for SNAR-F Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-F Gene

Publications for SNAR-F Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3 67

Products for SNAR-F Gene

Sources for SNAR-F Gene

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