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Aliases for SNAR-C3 Gene

Subcategory (RNA class) for SNAR-C3 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNAR-C3 Gene

  • Small ILF3/NF90-Associated RNA C3 2 3

External Ids for SNAR-C3 Gene

Previous GeneCards Identifiers for SNAR-C3 Gene

  • GC19U900929
  • GC19P048453

Summaries for SNAR-C3 Gene

GeneCards Summary for SNAR-C3 Gene

SNAR-C3 (Small ILF3/NF90-Associated RNA C3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-C3 Gene

Genomics for SNAR-C3 Gene

Genomic Location for SNAR-C3 Gene

47,950,296 bp from pter
47,950,414 bp from pter
119 bases
Plus strand

Genomic View for SNAR-C3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SNAR-C3 Gene

No data available for Regulatory Elements for SNAR-C3 Gene

Proteins for SNAR-C3 Gene

Post-translational modifications for SNAR-C3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-C3 Gene

Domains & Families for SNAR-C3 Gene

Gene Families for SNAR-C3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-C3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-C3 Gene

Function for SNAR-C3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-C3 Gene

Localization for SNAR-C3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-C3 Gene

Pathways & Interactions for SNAR-C3 Gene

SuperPathways for SNAR-C3 Gene

No Data Available

Interacting Proteins for SNAR-C3 Gene

Gene Ontology (GO) - Biological Process for SNAR-C3 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNAR-C3 Gene

Drugs & Compounds for SNAR-C3 Gene

No Compound Related Data Available

Transcripts for SNAR-C3 Gene

mRNA/cDNA for SNAR-C3 Gene

(1) Additional mRNA sequences :

Unigene Clusters for SNAR-C3 Gene

Small ILF3/NF90-associated RNA C3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-C3 Gene

No ASD Table

Relevant External Links for SNAR-C3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNAR-C3 Gene

SOURCE GeneReport for Unigene cluster for SNAR-C3 Gene Hs.467061

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNAR-C3 Gene

Orthologs for SNAR-C3 Gene

No data available for Orthologs and Evolution for SNAR-C3 Gene

Paralogs for SNAR-C3 Gene

No data available for Paralogs for SNAR-C3 Gene

Variants for SNAR-C3 Gene

Sequence variations from dbSNP and Humsavar for SNAR-C3 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs780108231 -- 47,949,797(+) TTTTT(-/A)GTAGA upstream-variant-2KB
rs758428799 -- 47,950,509(+) GTATC(-/T)TTTCT downstream-variant-500B
rs755757987 -- 47,949,352(+) CTGGC(A/T)GTTCC upstream-variant-2KB
rs754273568 -- 47,949,381(+) ATGCA(C/T)CATCT upstream-variant-2KB
rs569196012 -- 47,950,310(+) TTGTG(A/G)CTCCG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for SNAR-C3 Gene

Variant ID Type Subtype PubMed ID
nsv428367 CNV Gain+Loss 18775914
nsv2513 CNV Loss 18451855
nsv509748 CNV Insertion 20534489
esv991047 CNV Gain 20482838
nsv9739 CNV Gain+Loss 18304495
esv28347 CNV Gain+Loss 19812545
nsv2515 CNV Insertion 18451855
nsv180 CNV Insertion 15895083

Relevant External Links for SNAR-C3 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-C3 Gene

Disorders for SNAR-C3 Gene

Relevant External Links for SNAR-C3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SNAR-C3: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-C3 Gene

Publications for SNAR-C3 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 67

Products for SNAR-C3 Gene

Sources for SNAR-C3 Gene

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