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Aliases for SNAR-B1 Gene

Subcategory (RNA class) for SNAR-B1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNAR-B1 Gene

  • Small ILF3/NF90-Associated RNA B1 2 3

External Ids for SNAR-B1 Gene

Previous GeneCards Identifiers for SNAR-B1 Gene

  • GC19U900874
  • GC19M050637

Summaries for SNAR-B1 Gene

GeneCards Summary for SNAR-B1 Gene

SNAR-B1 (Small ILF3/NF90-Associated RNA B1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SNAR-B1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-B1 Gene

Genomics for SNAR-B1 Gene

Regulatory Elements for SNAR-B1 Gene

Enhancers for SNAR-B1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H050136 0.9 FANTOM5 0.7 -3.1 -3052 0.2 SIN3A ZNF2 ZEB1 ZNF121 ZNF366 POLR3A ZNF362 SP3 ZEB2 ZNF398 PRR12 AKT1S1 SCAF1 NUP62 PTOV1 KCNC3 SNAR-B2 SNAR-B1
GH19H050137 0.8 ENCODE 0.7 -3.3 -3255 0.2 SIN3A ZNF384 ZNF2 ZNF324 ZNF366 POLR3A ZNF600 PRDM10 KLF8 ZBTB20 SCAF1 PRR12 PTOV1 SNAR-B1 SNAR-B2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNAR-B1 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the SNAR-B1 gene promoter:

Genomic Locations for SNAR-B1 Gene

Genomic Locations for SNAR-B1 Gene
120 bases
Minus strand

Genomic View for SNAR-B1 Gene

Genes around SNAR-B1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-B1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-B1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-B1 Gene

Proteins for SNAR-B1 Gene

Post-translational modifications for SNAR-B1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-B1 Gene

Domains & Families for SNAR-B1 Gene

Gene Families for SNAR-B1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-B1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-B1 Gene

Function for SNAR-B1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-B1 Gene

Localization for SNAR-B1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNAR-B1 Gene

Pathways & Interactions for SNAR-B1 Gene

SuperPathways for SNAR-B1 Gene

No Data Available

Interacting Proteins for SNAR-B1 Gene

Gene Ontology (GO) - Biological Process for SNAR-B1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNAR-B1 Gene

Drugs & Compounds for SNAR-B1 Gene

No Compound Related Data Available

Transcripts for SNAR-B1 Gene

mRNA/cDNA for SNAR-B1 Gene

(1) Additional mRNA sequences :

Unigene Clusters for SNAR-B1 Gene

Small ILF3/NF90-associated RNA B1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-B1 Gene

No ASD Table

Relevant External Links for SNAR-B1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNAR-B1 Gene

SOURCE GeneReport for Unigene cluster for SNAR-B1 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNAR-B1 Gene

Orthologs for SNAR-B1 Gene

No data available for Orthologs and Evolution for SNAR-B1 Gene

Paralogs for SNAR-B1 Gene

No data available for Paralogs for SNAR-B1 Gene

Variants for SNAR-B1 Gene

Sequence variations from dbSNP and Humsavar for SNAR-B1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1011986778 -- 50,134,000(+) GGAGG(A/G)AGGGG upstream-variant-2KB
rs1023085469 -- 50,134,275(+) GTAAT(C/T)CCAGG upstream-variant-2KB
rs1035542983 -- 50,135,243(+) CTCCT(A/G)GTCCA upstream-variant-2KB
rs144670175 -- 50,133,877(+) GGCTG(A/T)CCTGT upstream-variant-2KB
rs192792916 -- 50,133,881(+) GTCCT(G/T)TAGGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-B1 Gene

Variant ID Type Subtype PubMed ID
nsv978834 CNV duplication 23825009
nsv9739 CNV gain+loss 18304495
nsv953602 CNV duplication 24416366
nsv820746 CNV deletion 20802225
nsv509749 CNV insertion 20534489
nsv469748 CNV gain+loss 16826518
nsv428369 CNV loss 18775914
nsv2526 CNV insertion 18451855
nsv1153134 CNV duplication 26484159
nsv1152956 OTHER inversion 26484159
nsv1141337 CNV duplication 24896259
nsv1140251 OTHER inversion 24896259
nsv1133010 OTHER inversion 24896259
nsv1078447 CNV duplication 25765185
nsv1067191 CNV gain 25217958
esv3342775 CNV duplication 20981092
esv2758766 CNV loss 17122850
esv2751796 CNV gain 17911159
esv24726 CNV gain+loss 19812545
dgv2020e59 CNV duplication 20981092

Relevant External Links for SNAR-B1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-B1 Gene

Disorders for SNAR-B1 Gene

Relevant External Links for SNAR-B1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNAR-B1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-B1 Gene

Publications for SNAR-B1 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott AM … Mathews MB (Nucleic acids research 2007) 3 60

Products for SNAR-B1 Gene

Sources for SNAR-B1 Gene

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