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Aliases for SNAR-A2 Gene

Subcategory (RNA class) for SNAR-A2 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-A2 Gene

  • Small ILF3/NF90-Associated RNA A2 2 3
  • Small Nuclear ILF3/NF90-Associated RNA A2 2 3
  • Small NF90-Associated RNA A53129250 3
  • SNAR-A53129250 3

External Ids for SNAR-A2 Gene

Previous GeneCards Identifiers for SNAR-A2 Gene

  • GC19U900966
  • GC19P048437

Summaries for SNAR-A2 Gene

GeneCards Summary for SNAR-A2 Gene

SNAR-A2 (Small ILF3/NF90-Associated RNA A2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A2 Gene

Genomics for SNAR-A2 Gene

Genomic Location for SNAR-A2 Gene

Start:
47,934,181 bp from pter
End:
47,934,302 bp from pter
Size:
122 bases
Orientation:
Plus strand

Genomic View for SNAR-A2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNAR-A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A2 Gene

No data available for Regulatory Elements for SNAR-A2 Gene

Proteins for SNAR-A2 Gene

Post-translational modifications for SNAR-A2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A2 Gene

Domains for SNAR-A2 Gene

Gene Families for SNAR-A2 Gene

HGNC:
  • snRNA :ncRNAs / Small nuclear RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-A2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-A2 Gene

Function for SNAR-A2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNAR-A2 Gene

Localization for SNAR-A2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-A2 Gene

Pathways for SNAR-A2 Gene

SuperPathways for SNAR-A2 Gene

No Data Available

Interacting Proteins for SNAR-A2 Gene

Gene Ontology (GO) - Biological Process for SNAR-A2 Gene

None

No data available for Pathways by source for SNAR-A2 Gene

Transcripts for SNAR-A2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A2 Gene

No ASD Table

Relevant External Links for SNAR-A2 Gene

GeneLoc Exon Structure for
SNAR-A2
ECgene alternative splicing isoforms for
SNAR-A2

No data available for mRNA/cDNA for SNAR-A2 Gene

Expression for SNAR-A2 Gene

SOURCE GeneReport for Unigene cluster for SNAR-A2 Gene Hs.723085

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNAR-A2 Gene

Orthologs for SNAR-A2 Gene

No data available for Orthologs and Evolution for SNAR-A2 Gene

Paralogs for SNAR-A2 Gene

No data available for Paralogs for SNAR-A2 Gene

Variants for SNAR-A2 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A2 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs71230347 -- 47,933,993(-) CATAG(G/T)AGATC upstream-variant-2KB
rs112554108 -- 47,934,434(+) TTGCC(A/C)TGTTG downstream-variant-500B
rs112730971 -- 47,933,883(+) TGTTA(C/T)CTTCC upstream-variant-2KB
rs112750155 -- 47,934,294(+) AAGGA(C/T)TTTTT nc-transcript-variant
rs145473228 -- 47,934,701(+) TCACT(C/G)TGTTG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A2 Gene

Variant ID Type Subtype PubMed ID
nsv428367 CNV Gain+Loss 18775914
nsv2513 CNV Loss 18451855
nsv509748 CNV Insertion 20534489
nsv178 CNV Loss 15895083
esv991047 CNV Gain 20482838
nsv9739 CNV Gain+Loss 18304495
esv28347 CNV Gain+Loss 19812545
nsv2514 CNV Insertion 18451855

Relevant External Links for SNAR-A2 Gene

HapMap Linkage Disequilibrium report
SNAR-A2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SNAR-A2 Gene

Disorders for SNAR-A2 Gene

No disorders were found for SNAR-A2 Gene.

No data available for UniProtKB/Swiss-Prot for SNAR-A2 Gene

Publications for SNAR-A2 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3

Products for SNAR-A2 Gene

Sources for SNAR-A2 Gene

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