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Aliases for SNAR-A11 Gene

Subcategory (RNA class) for SNAR-A11 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-A11 Gene

  • Small ILF3/NF90-Associated RNA A11 2 3
  • Small Nuclear ILF3/NF90-Associated RNA A11 2 3
  • SnaR-A55323591 3

External Ids for SNAR-A11 Gene

Previous GeneCards Identifiers for SNAR-A11 Gene

  • GC19U900820
  • GC19M050631

Summaries for SNAR-A11 Gene

GeneCards Summary for SNAR-A11 Gene

SNAR-A11 (Small ILF3/NF90-Associated RNA A11) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A11 Gene

Genomics for SNAR-A11 Gene

Regulatory Elements for SNAR-A11 Gene

Enhancers for SNAR-A11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around SNAR-A11 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNAR-A11 Gene

Chromosome:
19
Start:
50,128,402 bp from pter
End:
50,128,522 bp from pter
Size:
121 bases
Orientation:
Minus strand

Genomic View for SNAR-A11 Gene

Genes around SNAR-A11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-A11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-A11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A11 Gene

Proteins for SNAR-A11 Gene

Post-translational modifications for SNAR-A11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A11 Gene

Domains & Families for SNAR-A11 Gene

Gene Families for SNAR-A11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-A11: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-A11 Gene

Function for SNAR-A11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-A11 Gene

Localization for SNAR-A11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-A11 Gene

Pathways & Interactions for SNAR-A11 Gene

SuperPathways for SNAR-A11 Gene

No Data Available

Interacting Proteins for SNAR-A11 Gene

Gene Ontology (GO) - Biological Process for SNAR-A11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNAR-A11 Gene

Drugs & Compounds for SNAR-A11 Gene

No Compound Related Data Available

Transcripts for SNAR-A11 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A11 Gene

No ASD Table

Relevant External Links for SNAR-A11 Gene

GeneLoc Exon Structure for
SNAR-A11
ECgene alternative splicing isoforms for
SNAR-A11

No data available for mRNA/cDNA for SNAR-A11 Gene

Expression for SNAR-A11 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNAR-A11 Gene

Orthologs for SNAR-A11 Gene

No data available for Orthologs and Evolution for SNAR-A11 Gene

Paralogs for SNAR-A11 Gene

No data available for Paralogs for SNAR-A11 Gene

Variants for SNAR-A11 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A11 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs4801816 -- 50,129,756(-) TGGTG(A/G)CGCAT upstream-variant-2KB
rs4801817 -- 50,129,728(-) CTCGG(A/G)AGGCT upstream-variant-2KB
rs4801818 -- 50,129,724(-) GAAGG(C/G)TGAGG upstream-variant-2KB
rs112098300 -- 50,128,376(+) CTTTA(C/T)GTTTT downstream-variant-500B
rs62112575 -- 50,129,574(+) GATGT(A/C)ACCAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A11 Gene

Variant ID Type Subtype PubMed ID
dgv2017e59 CNV duplication 20981092
dgv2020e59 CNV duplication 20981092
esv24726 CNV gain+loss 19812545
esv2751796 CNV gain 17911159
esv2758766 CNV loss 17122850
esv28347 CNV gain+loss 19812545
esv3351443 CNV duplication 20981092
esv3396743 CNV duplication 20981092
esv3410554 CNV duplication 20981092
esv3432524 CNV duplication 20981092
esv3583447 CNV loss 25503493
esv991047 CNV gain 20482838
nsv1056164 CNV gain 25217958
nsv1058622 CNV gain 25217958
nsv1067191 CNV gain 25217958
nsv1078446 CNV duplication 25765185
nsv1078447 CNV duplication 25765185
nsv1124787 CNV duplication 24896259
nsv1133010 OTHER inversion 24896259
nsv1140251 OTHER inversion 24896259
nsv1141337 CNV duplication 24896259
nsv1152956 OTHER inversion 26484159
nsv1153134 CNV duplication 26484159
nsv178 CNV deletion 15895083
nsv2513 CNV deletion 18451855
nsv2514 CNV insertion 18451855
nsv2523 CNV insertion 18451855
nsv2524 CNV deletion 18451855
nsv2525 CNV insertion 18451855
nsv428367 CNV gain+loss 18775914
nsv428369 CNV loss 18775914
nsv469748 CNV gain+loss 16826518
nsv509748 CNV insertion 20534489
nsv509749 CNV insertion 20534489
nsv514900 CNV gain 21397061
nsv820746 CNV deletion 20802225
nsv953594 CNV duplication 24416366
nsv953601 CNV duplication 24416366
nsv953602 CNV duplication 24416366
nsv961230 CNV duplication 23825009
nsv9739 CNV gain+loss 18304495
nsv978834 CNV duplication 23825009

Relevant External Links for SNAR-A11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNAR-A11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-A11 Gene

Disorders for SNAR-A11 Gene

Relevant External Links for SNAR-A11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNAR-A11

No disorders were found for SNAR-A11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-A11 Gene

Publications for SNAR-A11 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3 65

Products for SNAR-A11 Gene

Sources for SNAR-A11 Gene

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