Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNAR-A10 Gene

Subcategory (RNA class) for SNAR-A10 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-A10 Gene

  • Small ILF3/NF90-Associated RNA A10 2 3
  • SnaR-A55318263 3

External Ids for SNAR-A10 Gene

Previous GeneCards Identifiers for SNAR-A10 Gene

  • GC19U900845
  • GC19M050626

Summaries for SNAR-A10 Gene

GeneCards Summary for SNAR-A10 Gene

SNAR-A10 (Small ILF3/NF90-Associated RNA A10) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A10 Gene

Genomics for SNAR-A10 Gene

Regulatory Elements for SNAR-A10 Gene

Enhancers for SNAR-A10 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SNAR-A10 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNAR-A10 Gene

Chromosome:
19
Start:
50,123,074 bp from pter
End:
50,123,194 bp from pter
Size:
121 bases
Orientation:
Minus strand

Genomic View for SNAR-A10 Gene

Genes around SNAR-A10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-A10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-A10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A10 Gene

Proteins for SNAR-A10 Gene

Post-translational modifications for SNAR-A10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A10 Gene

Domains & Families for SNAR-A10 Gene

Gene Families for SNAR-A10 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-A10: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-A10 Gene

Function for SNAR-A10 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-A10 Gene

Localization for SNAR-A10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAR-A10 Gene

Pathways & Interactions for SNAR-A10 Gene

SuperPathways for SNAR-A10 Gene

No Data Available

Interacting Proteins for SNAR-A10 Gene

Gene Ontology (GO) - Biological Process for SNAR-A10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNAR-A10 Gene

Drugs & Compounds for SNAR-A10 Gene

No Compound Related Data Available

Transcripts for SNAR-A10 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A10 Gene

No ASD Table

Relevant External Links for SNAR-A10 Gene

GeneLoc Exon Structure for
SNAR-A10
ECgene alternative splicing isoforms for
SNAR-A10

No data available for mRNA/cDNA for SNAR-A10 Gene

Expression for SNAR-A10 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNAR-A10 Gene

Orthologs for SNAR-A10 Gene

No data available for Orthologs and Evolution for SNAR-A10 Gene

Paralogs for SNAR-A10 Gene

No data available for Paralogs for SNAR-A10 Gene

Variants for SNAR-A10 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A10 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs74337015 -- 50,123,881(+) ACAAA(A/C)AAAAA upstream-variant-2KB
rs372102565 -- 50,123,869(+) AAAAC(-/A)AAACA upstream-variant-2KB
rs111428952 -- 50,122,575(+) CTCAG(C/G)AGGCT downstream-variant-500B
rs368899 -- 50,125,161(+) ACCCA(C/G)AGATA upstream-variant-2KB
rs199613083 -- 50,123,966(+) TTTAA(C/G)ATAAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A10 Gene

Variant ID Type Subtype PubMed ID
nsv428367 CNV Gain+Loss 18775914
nsv2513 CNV Loss 18451855
nsv509748 CNV Insertion 20534489
nsv178 CNV Loss 15895083
esv991047 CNV Gain 20482838
nsv9739 CNV Gain+Loss 18304495
esv28347 CNV Gain+Loss 19812545
nsv2514 CNV Insertion 18451855
esv2751796 CNV Gain 17911159
nsv469748 CNV Complex 16826518
dgv1108e1 CNV Complex 17122850
nsv428369 CNV Loss 18775914
nsv2523 CNV Insertion 18451855
nsv2524 CNV Loss 18451855
nsv509749 CNV Insertion 20534489
esv24726 CNV Gain+Loss 19812545
nsv820746 CNV Deletion 20802225
nsv514900 CNV Complex 21397061
nsv2525 CNV Insertion 18451855
dgv3975n71 CNV Gain 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for SNAR-A10 Gene

Disorders for SNAR-A10 Gene

Relevant External Links for SNAR-A10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNAR-A10

No disorders were found for SNAR-A10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-A10 Gene

Publications for SNAR-A10 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3 67

Products for SNAR-A10 Gene

Sources for SNAR-A10 Gene

Content