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Aliases for SNAR-A10 Gene

Subcategory (RNA class) for SNAR-A10 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-A10 Gene

  • Small ILF3/NF90-Associated RNA A10 2 3
  • SnaR-A55318263 3

External Ids for SNAR-A10 Gene

Previous GeneCards Identifiers for SNAR-A10 Gene

  • GC19U900845
  • GC19M050626

Summaries for SNAR-A10 Gene

GeneCards Summary for SNAR-A10 Gene

SNAR-A10 (Small ILF3/NF90-Associated RNA A10) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SNAR-A10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A10 Gene

Genomics for SNAR-A10 Gene

Genomic Location for SNAR-A10 Gene

Chromosome:
19
Start:
50,123,074 bp from pter
End:
50,123,194 bp from pter
Size:
121 bases
Orientation:
Minus strand

Genomic View for SNAR-A10 Gene

Genes around SNAR-A10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-A10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-A10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A10 Gene

No data available for Regulatory Elements for SNAR-A10 Gene

Proteins for SNAR-A10 Gene

Post-translational modifications for SNAR-A10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A10 Gene

Domains & Families for SNAR-A10 Gene

Gene Families for SNAR-A10 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-A10: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-A10 Gene

Function for SNAR-A10 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNAR-A10
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-A10 Gene

Localization for SNAR-A10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNAR-A10 Gene

Pathways & Interactions for SNAR-A10 Gene

SuperPathways for SNAR-A10 Gene

No Data Available

Interacting Proteins for SNAR-A10 Gene

Gene Ontology (GO) - Biological Process for SNAR-A10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNAR-A10 Gene

Drugs & Compounds for SNAR-A10 Gene

No Compound Related Data Available

Transcripts for SNAR-A10 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNAR-A10
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A10 Gene

No ASD Table

Relevant External Links for SNAR-A10 Gene

GeneLoc Exon Structure for
SNAR-A10
ECgene alternative splicing isoforms for
SNAR-A10

No data available for mRNA/cDNA for SNAR-A10 Gene

Expression for SNAR-A10 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNAR-A10 Gene

Orthologs for SNAR-A10 Gene

No data available for Orthologs and Evolution for SNAR-A10 Gene

Paralogs for SNAR-A10 Gene

No data available for Paralogs for SNAR-A10 Gene

Variants for SNAR-A10 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A10 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs111428952 -- 50,122,575(+) CTCAG(C/G)AGGCT downstream-variant-500B
rs112975391 -- 50,123,056(+) TTTGT(C/T)GTTAT downstream-variant-500B
rs199698465 -- 50,124,279(+) TTTTT(-/T)CTTTT upstream-variant-2KB
rs201344504 -- 50,123,888(+) AAAAA(-/A)GCAAA upstream-variant-2KB
rs201671983 -- 50,123,896(+) AAAAA(C/G)AAACA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A10 Gene

Variant ID Type Subtype PubMed ID
dgv2017e59 CNV duplication 20981092
dgv2020e59 CNV duplication 20981092
esv24726 CNV gain+loss 19812545
esv2751796 CNV gain 17911159
esv2758766 CNV loss 17122850
esv28347 CNV gain+loss 19812545
esv3351443 CNV duplication 20981092
esv3396743 CNV duplication 20981092
esv3410554 CNV duplication 20981092
esv3432524 CNV duplication 20981092
esv3583447 CNV loss 25503493
esv991047 CNV gain 20482838
nsv1056164 CNV gain 25217958
nsv1058622 CNV gain 25217958
nsv1067191 CNV gain 25217958
nsv1078446 CNV duplication 25765185
nsv1078447 CNV duplication 25765185
nsv1124787 CNV duplication 24896259
nsv1133010 OTHER inversion 24896259
nsv1140251 OTHER inversion 24896259
nsv1141337 CNV duplication 24896259
nsv1152956 OTHER inversion 26484159
nsv1153134 CNV duplication 26484159
nsv178 CNV deletion 15895083
nsv2513 CNV deletion 18451855
nsv2514 CNV insertion 18451855
nsv2523 CNV insertion 18451855
nsv2524 CNV deletion 18451855
nsv2525 CNV insertion 18451855
nsv428367 CNV gain+loss 18775914
nsv428369 CNV loss 18775914
nsv469748 CNV gain+loss 16826518
nsv509748 CNV insertion 20534489
nsv509749 CNV insertion 20534489
nsv514900 CNV gain 21397061
nsv820746 CNV deletion 20802225
nsv953594 CNV duplication 24416366
nsv953601 CNV duplication 24416366
nsv953602 CNV duplication 24416366
nsv961230 CNV duplication 23825009
nsv9739 CNV gain+loss 18304495
nsv978834 CNV duplication 23825009

Relevant External Links for SNAR-A10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNAR-A10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-A10 Gene

Disorders for SNAR-A10 Gene

Relevant External Links for SNAR-A10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNAR-A10

No disorders were found for SNAR-A10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-A10 Gene

Publications for SNAR-A10 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott AM … Mathews MB (Nucleic acids research 2007) 3 60

Products for SNAR-A10 Gene

Sources for SNAR-A10 Gene

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