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Aliases for SNAR-A1 Gene

Subcategory (RNA class) for SNAR-A1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNAR-A1 Gene

  • Small ILF3/NF90-Associated RNA A1 2 3
  • Small Nuclear ILF3/NF90-Associated RNA A1 2 3
  • Small NF90-Associated RNA A53113498 3
  • SNAR-A53113498 3

External Ids for SNAR-A1 Gene

Summaries for SNAR-A1 Gene

GeneCards Summary for SNAR-A1 Gene

SNAR-A1 (Small ILF3/NF90-Associated RNA A1) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A1 Gene

Genomics for SNAR-A1 Gene

Genomic Location for SNAR-A1 Gene

Start:
47,918,429 bp from pter
End:
47,918,550 bp from pter
Size:
122 bases
Orientation:
Plus strand

Genomic View for SNAR-A1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNAR-A1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A1 Gene

Regulatory Elements for SNAR-A1 Gene

Transcription factor binding sites by QIAGEN in the SNAR-A1 gene promoter:

Proteins for SNAR-A1 Gene

Post-translational modifications for SNAR-A1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A1 Gene

Domains for SNAR-A1 Gene

Gene Families for SNAR-A1 Gene

HGNC:
  • snRNA :ncRNAs / Small nuclear RNAs
genes like me logo Genes that share domains with SNAR-A1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNAR-A1 Gene

Function for SNAR-A1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNAR-A1 Gene

Localization for SNAR-A1 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNAR-A1 Gene

Pathways for SNAR-A1 Gene

SuperPathways for SNAR-A1 Gene

No Data Available

Interacting Proteins for SNAR-A1 Gene

Gene Ontology (GO) - Biological Process for SNAR-A1 Gene

None

No data available for Pathways by source for SNAR-A1 Gene

Transcripts for SNAR-A1 Gene

mRNA/cDNA for SNAR-A1 Gene

(1) Additional mRNA sequences :

Unigene Clusters for SNAR-A1 Gene

Small ILF3/NF90-associated RNA A1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A1 Gene

No ASD Table

Relevant External Links for SNAR-A1 Gene

GeneLoc Exon Structure for
SNAR-A1
ECgene alternative splicing isoforms for
SNAR-A1

Expression for SNAR-A1 Gene

mRNA expression in normal human tissues for SNAR-A1 Gene

mRNA expression in normal human tissues for SNAR-A1 Gene

SOURCE GeneReport for Unigene cluster for SNAR-A1 Gene Hs.579631

genes like me logo Genes that share expressions with SNAR-A1: view

Orthologs for SNAR-A1 Gene

No data available for Orthologs and Evolution for SNAR-A1 Gene

Paralogs for SNAR-A1 Gene

No data available for Paralogs for SNAR-A1 Gene

Variants for SNAR-A1 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs56085982 -- 47,917,762(+) TTTGA(C/G)ATGGA upstream-variant-2KB
rs56691728 -- 47,917,593(+) ACCAA(C/G)ATTTC upstream-variant-2KB
rs62130004 -- 47,917,585(+) TGGTC(C/G)AAACC upstream-variant-2KB
rs62130005 -- 47,918,576(+) AAAAC(A/G)TAAAG downstream-variant-500B
rs192159439 -- 47,918,729(+) TGCAA(A/C)CTCCG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A1 Gene

Variant ID Type Subtype PubMed ID
nsv428367 CNV Gain+Loss 18775914
nsv2513 CNV Loss 18451855
nsv509748 CNV Insertion 20534489
nsv178 CNV Loss 15895083
esv991047 CNV Gain 20482838
nsv9739 CNV Gain+Loss 18304495
esv28347 CNV Gain+Loss 19812545
nsv2514 CNV Insertion 18451855

Relevant External Links for SNAR-A1 Gene

HapMap Linkage Disequilibrium report
SNAR-A1

Disorders for SNAR-A1 Gene

No disorders were found for SNAR-A1 Gene.

No data available for UniProtKB/Swiss-Prot for SNAR-A1 Gene

Publications for SNAR-A1 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott A.M. … Mathews M.B. (Nucleic Acids Res. 2007) 3

Products for SNAR-A1 Gene

Sources for SNAR-A1 Gene

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