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Aliases for SNAP47-AS1 Gene

Subcategory (RNA class) for SNAP47-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNAP47-AS1 Gene

  • SNAP47 Antisense RNA 1 2 3 5
  • SNAP47 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • SNAP47 Antisense RNA 1 (Non-Protein Coding) 2 3
  • SNAP47-IT1 3

External Ids for SNAP47-AS1 Gene

Previous HGNC Symbols for SNAP47-AS1 Gene

  • SNAP47-IT1

Previous GeneCards Identifiers for SNAP47-AS1 Gene

  • GC01P227933
  • GC01M227932

Summaries for SNAP47-AS1 Gene

GeneCards Summary for SNAP47-AS1 Gene

SNAP47-AS1 (SNAP47 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAP47-AS1 Gene

Genomics for SNAP47-AS1 Gene

Regulatory Elements for SNAP47-AS1 Gene

Enhancers for SNAP47-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F227748 0.6 FANTOM5 ENCODE 0.8 -1.8 -1835 1.8 HDAC1 PKNOX1 ATF1 TBL1XR1 RCOR1 CREM SMARCA5 ZBTB11 CEBPB NCOA1 SNAP47 ZNF678 SNAP47-AS1 LOC105373289
GH01F227758 1.2 Ensembl ENCODE 0.4 -12.5 -12507 2.3 ARID4B SIN3A ZNF2 ZNF48 ZNF121 GLIS2 ELK1 KLF7 FOS ZNF263 WNT3A SNAP47 SNAP47-AS1 LOC105373289
GH01F227767 0.2 ENCODE 0.3 -21.2 -21166 1.0 LOC105373289 SNAP47-AS1
GH01F227765 0.8 FANTOM5 Ensembl ENCODE 0.3 -19.0 -18979 2.1 PKNOX1 ZNF133 GLI4 FEZF1 ZNF2 ZNF48 GLIS2 FOS ZNF263 SP3 C1orf35 ENSG00000231563 SNAP47 JMJD4 IBA57 SNAP47-AS1 LOC105373289
GH01F227761 0.5 Ensembl ENCODE 0.3 -16.1 -16056 3.4 PKNOX1 ARID4B SIN3A ZNF48 ZNF2 GLIS2 ZNF143 ZNF263 REST MAFF WNT3A SNAP47 SNAP47-AS1 LOC105373289
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNAP47-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNAP47-AS1 Gene

227,743,831 bp from pter
227,747,191 bp from pter
3,361 bases
Minus strand

Genomic View for SNAP47-AS1 Gene

Genes around SNAP47-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAP47-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAP47-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SNAP47-AS1 Gene

Proteins for SNAP47-AS1 Gene

Post-translational modifications for SNAP47-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAP47-AS1 Gene

Domains & Families for SNAP47-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAP47-AS1 Gene

Function for SNAP47-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAP47-AS1 Gene

Localization for SNAP47-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNAP47-AS1 Gene

Pathways & Interactions for SNAP47-AS1 Gene

SuperPathways for SNAP47-AS1 Gene

No Data Available

Interacting Proteins for SNAP47-AS1 Gene

Gene Ontology (GO) - Biological Process for SNAP47-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNAP47-AS1 Gene

Transcripts for SNAP47-AS1 Gene

mRNA/cDNA for SNAP47-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNAP47-AS1 Gene

SNAP47 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNAP47-AS1 Gene

No ASD Table

Relevant External Links for SNAP47-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNAP47-AS1 Gene

mRNA expression in normal human tissues for SNAP47-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SNAP47-AS1 Gene

This gene is overexpressed in Testis (x13.0).

SOURCE GeneReport for Unigene cluster for SNAP47-AS1 Gene:

genes like me logo Genes that share expression patterns with SNAP47-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNAP47-AS1 Gene

Orthologs for SNAP47-AS1 Gene

Evolution for SNAP47-AS1 Gene

Gene Tree for SNAP47-AS1 (if available)
Gene Tree for SNAP47-AS1 (if available)

No data available for Orthologs for SNAP47-AS1 Gene

Paralogs for SNAP47-AS1 Gene

No data available for Paralogs for SNAP47-AS1 Gene

Variants for SNAP47-AS1 Gene

Relevant External Links for SNAP47-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNAP47-AS1 Gene

Disorders for SNAP47-AS1 Gene

Relevant External Links for SNAP47-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNAP47-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAP47-AS1 Gene

Publications for SNAP47-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for SNAP47-AS1 Gene

Sources for SNAP47-AS1 Gene

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