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Aliases for SNAP25-AS1 Gene

Subcategory (RNA class) for SNAP25-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for SNAP25-AS1 Gene

  • SNAP25 Antisense RNA 1 2 3
  • SNAP25 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SNAP25-AS1 Gene

ORGUL Members for SNAP25-AS1 Gene

Summaries for SNAP25-AS1 Gene

GeneCards Summary for SNAP25-AS1 Gene

SNAP25-AS1 (SNAP25 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAP25-AS1 Gene

Genomics for SNAP25-AS1 Gene

Genomic Location for SNAP25-AS1 Gene

Start:
10,021,978 bp from pter
End:
10,368,776 bp from pter
Size:
346,799 bases
Orientation:
Minus strand

Genomic View for SNAP25-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNAP25-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAP25-AS1 Gene

No data available for Regulatory Elements for SNAP25-AS1 Gene

Proteins for SNAP25-AS1 Gene

Post-translational modifications for SNAP25-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAP25-AS1 Gene

Domains for SNAP25-AS1 Gene

Gene Families for SNAP25-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with SNAP25-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNAP25-AS1 Gene

Function for SNAP25-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNAP25-AS1 Gene

Localization for SNAP25-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNAP25-AS1 Gene

Pathways for SNAP25-AS1 Gene

SuperPathways for SNAP25-AS1 Gene

No Data Available

Interacting Proteins for SNAP25-AS1 Gene

Gene Ontology (GO) - Biological Process for SNAP25-AS1 Gene

None

No data available for Pathways by source for SNAP25-AS1 Gene

Transcripts for SNAP25-AS1 Gene

mRNA/cDNA for SNAP25-AS1 Gene

(4) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNAP25-AS1 Gene

SNAP25 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNAP25-AS1 Gene

No ASD Table

Relevant External Links for SNAP25-AS1 Gene

GeneLoc Exon Structure for
SNAP25-AS1
ECgene alternative splicing isoforms for
SNAP25-AS1

Expression for SNAP25-AS1 Gene

mRNA expression in normal human tissues for SNAP25-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SNAP25-AS1 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (4.9) and Brain - Frontal Cortex (BA9) (4.5).

SOURCE GeneReport for Unigene cluster for SNAP25-AS1 Gene Hs.658178

genes like me logo Genes that share expressions with SNAP25-AS1: view

Orthologs for SNAP25-AS1 Gene

Evolution for SNAP25-AS1 Gene

ENSEMBL:
Gene Tree for SNAP25-AS1 (if available)
TreeFam:
Gene Tree for SNAP25-AS1 (if available)

No data available for Orthologs for SNAP25-AS1 Gene

Paralogs for SNAP25-AS1 Gene

No data available for Paralogs for SNAP25-AS1 Gene

Variants for SNAP25-AS1 Gene

Sequence variations from dbSNP and Humsavar for SNAP25-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs127733 -- 10,106,205(+) TGATC(A/G)TATCT intron-variant
rs471085 -- 10,057,992(+) TCTTC(A/C)AGAAT intron-variant
rs473369 -- 10,101,102(+) ACAAA(A/C)TTAAA intron-variant
rs474169 -- 10,101,152(+) CCAGG(C/T)AAGGG intron-variant
rs474196 -- 10,134,589(+) GACTA(C/T)TGTTT intron-variant

Relevant External Links for SNAP25-AS1 Gene

HapMap Linkage Disequilibrium report
SNAP25-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for SNAP25-AS1 Gene

Disorders for SNAP25-AS1 Gene

No disorders were found for SNAP25-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SNAP25-AS1 Gene

Publications for SNAP25-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  2. Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan. (PMID: 23648065) Low S.K. … Nakamura Y. (Cancer Sci. 2013) 3

Products for SNAP25-AS1 Gene

Sources for SNAP25-AS1 Gene

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