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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SMPD4 Gene

protein-coding   GIFtS: 52
GCID: GC02M130908

sphingomyelin phosphodiesterase 4, neutral membrane (neutral...

 Explore 3 diseases affiliated with
SMPD4 via our new
 Human Malady Compendium 
Biological research products
for SMPD4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Sphingomyelin Phosphodiesterase 4, Neutral Membrane (Neutral
Sphingomyelinase-3)1 2
     FLJ202971
NET131 2     FLJ207561
NSMASE31 2     NSMASE-32
KIAA14181 3     SKNY Protein2
NSMase-31     Sphingomyelin Phosphodiesterase 42
Neutral Sphingomyelinase 32 3     EC 3.1.4.123
Neutral Sphingomyelinase III2 3     NSMase31

External Ids:    HGNC: 329491   Entrez Gene: 556272   Ensembl: ENSG000001366997   OMIM: 6104575   UniProtKB: Q9NXE43   
ORGUL members:         
NONCODE:n409101    

Export aliases for SMPD4 gene to outside databases

Previous GC identifers: GC02M130626 GC02M123204


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SMPD4:
Sphingomyelinases (EC 3.1.4.12), such as SMPD4, catalyze the hydrolysis of membrane sphingomyelin to form
phosphorylcholine and ceramide (Krut et al., 2006 (PubMed 16517606)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: NSMA3_HUMAN, Q9NXE4
Function: Catalyzes the hydrolysis of membrane sphingomyelin to form phosphorylcholine and ceramide

Gene Wiki entry for SMPD4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022135.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SMPD4 gene promoter:
         HFH-3   Sox5   Sp1   CUTL1   XBP-1   Arnt   E47   FOXI1   RORalpha1   AREB6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSMPD4 promoter sequence
   Search SABiosciences Chromatin IP Primers for SMPD4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SMPD4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q21.1   Ensembl cytogenetic band:  2q21.1   HGNC cytogenetic band: 2q21.1

SMPD4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SMPD4 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M130908:  view genomic region     (about GC identifiers)

Start:
130,908,965 bp from pter      End:
130,940,323 bp from pter
Size:
31,359 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: NSMA3_HUMAN, Q9NXE4 (See protein sequence)
Recommended Name: Sphingomyelin phosphodiesterase 4  
Size: 827 amino acids; 93352 Da
Cofactor: Magnesium
Subcellular location: Endoplasmic reticulum membrane; Single-pass membrane protein. Golgi apparatus membrane;
Single-pass membrane protein
Sequence caution: Sequence=BAA91368.1; Type=Erroneous initiation; Sequence=BAA91567.1; Type=Erroneous initiation;
Sequence=BAA92656.1; Type=Erroneous initiation;
Secondary accessions: B4DRB8 E7ESA2 Q6FI76 Q6P1P7 Q6ZT43 Q9H0M2 Q9NW20 Q9NWL2 Q9P2C9
Alternative splicing: 6 isoforms:  Q9NXE4-1   Q9NXE4-2   Q9NXE4-3   Q9NXE4-4   Q9NXE4-5   Q9NXE4-6   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SMPD4: NX_Q9NXE4

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9NXE4

  • SMPD4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001164554.1  NP_060221.2  NP_060421.2  

    ENSEMBL proteins: 
     ENSP00000407591   ENSP00000403002   ENSP00000397278   ENSP00000259217   ENSP00000401648  
     ENSP00000386531   ENSP00000397078   ENSP00000403915   ENSP00000406325   ENSP00000405363  
     ENSP00000393791   ENSP00000416208   ENSP00000406458   ENSP00000405187   ENSP00000394313  
     ENSP00000339721   ENSP00000387762   ENSP00000397479   ENSP00000391896  
    Reactome Protein details: Q9NXE4
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    Uscn Proteins for SMPD4

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane IEA--
    GO:0005783endoplasmic reticulum IDA18505924
    GO:0005789endoplasmic reticulum membrane TAS--
    GO:0005794Golgi apparatus IDA16517606
    GO:0005802trans-Golgi network IDA16517606


    SMPD4 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SMPD4 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR024129 Sphingomy_SMPD4

    Graphical View of Domain Structure for InterPro Entry Q9NXE4

    ProtoNet protein and cluster: Q9NXE4


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: NSMA3_HUMAN, Q9NXE4
    Function: Catalyzes the hydrolysis of membrane sphingomyelin to form phosphorylcholine and ceramide
    Catalytic activity: Sphingomyelin + H(2)O = N-acylsphingosine + phosphocholine
    Enzyme regulation: Activated by phosphatidylserine and tumor necrosis factor (TNF). Inhibited by scyphostatin
    Biophysicochemical properties: pH dependence: Optimum pH is 7.0;

    Enzyme Number (IUBMB): EC 3.1.4.121

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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004767sphingomyelin phosphodiesterase activity TAS--
    GO:0046872metal ion binding IEA--
    GO:0050290sphingomyelin phosphodiesterase D activity IDA16517606


    SMPD4 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Sphingolipid metabolism
    Sphingolipid metabolism1.00
    Sphingolipid metabolism0.54
    Glycosphingolipid metabolism0.54
    2Metabolism
    Metabolism1.00
    Metabolism of lipids and lipoproteins0.34
    Metabolic pathways0.38
    3sphingomyelin metabolism
    sphingomyelin metabolism1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for SMPD4 
        sphingomyelin metabolism

    4        Reactome Pathways for SMPD4
        Sphingolipid metabolism
    Glycosphingolipid metabolism
    Metabolism
    Metabolism of lipids and lipoproteins


    2         Kegg Pathways  (Kegg details for SMPD4):
        Sphingolipid metabolism
    Metabolic pathways


    SMPD4 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SMPD4

    2 Interacting proteins for SMPD4 (Q9NXE43) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    BRF2Q9HAW03I2D: score=2 
    EXOSC4Q9NPD33I2D: score=2 
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006644phospholipid metabolic process TAS--
    GO:0006665sphingolipid metabolic process TAS--
    GO:0006685sphingomyelin catabolic process IDA16517606
    GO:0006687glycosphingolipid metabolic process TAS--
    GO:0044281small molecule metabolic process TAS--


    SMPD4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SMPD4

    10/277 HMDB Compounds for SMPD4 (see all 277)    About this table
    CompoundSynonyms CAS #PubMed Ids
    3-O-Sulfogalactosylceramide (d18:1/12:0)Sulfatide (d18:1/12:0) (see all 13)852100-88-0--
    3-O-Sulfogalactosylceramide (d18:1/14:0)Sulfatide (d18:1/14:0) (see all 13)----
    3-O-Sulfogalactosylceramide (d18:1/16:0)Sulfatide (d18:1/16:0) (see all 13)862509-48-6--
    3-O-Sulfogalactosylceramide (d18:1/18:0)Sulfatide (d18:1/18:0) (see all 13)244215-65-4--
    3-O-Sulfogalactosylceramide (d18:1/18:1(9Z))Sulfatide (d18:1/18:1(9Z)) (see all 13)----
    3-O-Sulfogalactosylceramide (d18:1/20:0)Sulfatide (d18:1/20:0) (see all 13)265096-81-9--
    3-O-Sulfogalactosylceramide (d18:1/22:0)Sulfatide (d18:1/22:0) (see all 13)265096-83-1--
    3-O-Sulfogalactosylceramide (d18:1/24:0)Sulfatide (d18:1/24:0) (see all 16)151122-71-3--
    3-O-Sulfogalactosylceramide (d18:1/24:1(15Z))Sulfatide (d18:1/24:1(15Z)) (see all 13)151057-28-2--
    3-O-Sulfogalactosylceramide (d18:1/26:1(17Z))Sulfatide (d18:1/26:1(17Z)) (see all 13)928346-40-1--

    1 DrugBank Compound for SMPD4    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Phosphatidylserine3-O-sn-Phosphatidyl-L-serine (see all 3)8002-43-5target--16517606

    Search CenterWatch for drugs/clinical trials and news about SMPD4 / NSMA3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SMPD4 gene (4 alternative transcripts): 
    NM_001171084.1  NM_001171083.2  NM_017751.4  NM_017951.4  

    Unigene Cluster for SMPD4:

    Sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
    Hs.516450  [show with all ESTs]
    Unigene Representative Sequence: NR_033230
    18/25 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 25):
    ENST00000454468 ENST00000412570 ENST00000433118 ENST00000351288 ENST00000491319
    ENST00000491128 ENST00000482171(uc002tqo.2) ENST00000439886(uc002tqp.2)
    ENST00000409031(uc002tqq.2 uc002tqs.2 uc002tqr.2 uc010zaa.2 uc002tqt.2 uc010zac.2)
    ENST00000457039 ENST00000449159 ENST00000461187 ENST00000430682 ENST00000451542
    ENST00000435455 ENST00000473720 ENST00000455548 ENST00000439029

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    Additional cDNA sequence: 

    AB037839.1 AF052134.1 AK000304.1 AK000763.1 AK001227.1 AK056501.1 AK297257.1 AK298609.1 
    AK299185.1 AK301576.1 AK303427.1 AK303519.1 AL136737.1 BC040941.1 BC064947.1 CR533550.1 
    EU367941.1 NR_033230.2 NR_033231.2 NR_033232.2 

    24/51 DOTS entries (see all 51):

    DT.95197752  DT.95357791  DT.100812250  DT.100687923  DT.75116930  DT.100770995  DT.91906072  DT.95357895 
    DT.100828532  DT.100828524  DT.95288728  DT.100040544  DT.95175789  DT.100705237  DT.100828541  DT.120981062 
    DT.100828526  DT.100639700  DT.100828531  DT.100828540  DT.120981411  DT.100696219  DT.120981393  DT.120981453 

    24/441 AceView cDNA sequences (see all 441):

    BQ053365 BE394493 BQ061712 BQ960112 BX402032 BX382883 BU501958 BU839704 
    BQ071044 BU183651 CA432590 AW470904 BI085068 AW298068 BE908461 CR614315 
    AI393912 BQ688894 BU148777 BQ651962 BQ944977 BX282168 BQ061738 BQ051799 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SMPD4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TCCTTGCTTC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See SMPD4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SMPD4

    SOURCE GeneReport for Unigene cluster: Hs.516450

    UniProtKB/Swiss-Prot: NSMA3_HUMAN, Q9NXE4
    Tissue specificity: Widely expressed, with highest levels in heart and skeletal muscle

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SMPD4 gene from 6/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Smpd41 , 5 sphingomyelin phosphodiesterase 41, 5 85.37(n)1
    90.16(a)1
      16 (10.92 cM)5
    776261  NM_001164610.11  NP_001158082.11 
     176193545 
    chicken
    (Gallus gallus)
    Aves SMPD41 sphingomyelin phosphodiesterase 4, neutral membrane more 70.63(n)
    75.15(a)
      416942  XM_415236.3  XP_415236.2 
    lizard
    (Anolis carolinensis)
    Reptilia SMPD46
    --
    63(a)
    1 ↔ 1
    GL343947.1(106713-114663)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.47132 Xenopus laevis, Similar to hypothetical protein FLJ2 more 74.41(n)    BC044113.1 
    zebrafish
    (Danio rerio)
    Actinopterygii wufb22d052 Danio rerio cDNA clone MGC66367 IMAGE5611820, complete more 75.36(n)    BC057525.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG69621 CG6962 42.72(n)
    28.85(a)
      41436  NM_141867.3  NP_650124.1 


    ENSEMBL Gene Tree for SMPD4 (if available)
    TreeFam Gene Tree for SMPD4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SMPD4 gene

    SMPD4 for paralogs           About GeneDecksing


    5/6 Pseudogenes.org Pseudogenes for SMPD4 (see all 6)
    PGOHUM00000248303 PGOHUM00000248304 PGOHUM00000246243 PGOHUM00000246244 PGOHUM00000250475


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/635 NCBI SNPs in SMPD4 are shown (see all 635    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs24074641,2
    --130908465(+) CAGCCA/CCCAAG 6 -- ds50010--------
    rs24074651,2
    --130908511(+) TCTCAA/GTGCAT 6 -- ds50010--------
    rs24074661,2
    --130908515(+) AATGCA/GTTTTT 6 -- ds50010--------
    rs24074671,2
    --130908522(+) TTTTGC/TCTGCC 6 -- ds50010--------
    rs23138361,2
    --130908529(-) AGCGGA/GGGGCA 6 -- ds50011Minor allele frequency- G:0.00NA 2
    rs28976701,2
    C,H,--130908576(+) ATCCTC/TAGAGC 6 -- ds50014Minor allele frequency- T:0.00NS EA 416
    rs1131288721,2
    --130908617(+) TTCCCG/AGTGGT 6 -- ds50011Minor allele frequency- A:0.50CSA 2
    rs39586931,2
    --130908720(+) cctgaC/Tgatcc 6 -- ds50010--------
    rs797918331,2
    C,--130908721(-) AGGATT/CATCAG 6 -- ds50011Minor allele frequency- C:0.00NA 2
    rs38563751,2
    C,H,--130908770(+) GAACCA/GCCATG 6 -- ds50015Minor allele frequency- G:0.00NA CSA 11

    HapMap Linkage Disequilibrium report for SMPD4 (130908965 - 130940323 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for SMPD4
         4 CNVs: 0269 3393 2408 8387

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SMPD4 for disorders           About GeneDecksing

    OMIM gene information: 610457    OMIM disorders: --

    3 diseases for SMPD4:    About MalaCards
    breast cancer    immunodeficiency    neuronitis

    Human Genome Epidemiology (HuGE) Navigator: SMPD4 (3 documents)

    Export disorders for SMPD4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SMPD4 gene, integrated from 9 sources (see all 27):
    (articles sorted by number of sources associating them with SMPD4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Novel tumor necrosis factor-responsive mammalian neutral sphingomyelinase-3 is a C-tail-anchored protein. (PubMed id 16517606)1, 2, 3, 7 Krut O.... Kroenke M. (2006)
    2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)1, 2 Hillier L.W....Wilson R.K. (2005)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    5. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PubMed id 11230166)1, 2 Wiemann S.... Poustka A. (2001)
    6. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10718198)1, 2 Nagase T.... Ohara O. (2000)
    7. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
    8. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    9. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    10. System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692)2 Rigbolt K.T....Blagoev B. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 55627 HGNC: 32949 AceView: FLJ20297 Ensembl:ENSG00000136699 euGenes: HUgn55627
    ECgene: SMPD4 Kegg: 55627 H-InvDB: SMPD4

    (According to HUGE)
    About This Section
    HUGE: KIAA1418

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SMPD4 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SMPD4 gene:
    Search GeneIP for patents involving SMPD4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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