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Aliases for SMNP Gene

Aliases for SMNP Gene

  • Survival Of Motor Neuron 1, Telomeric Pseudogene 3
  • RP11-15P13.1 5

External Ids for SMNP Gene

Previous GeneCards Identifiers for SMNP Gene

  • GC09U990151

Summaries for SMNP Gene

GeneCards Summary for SMNP Gene

SMNP (Survival Of Motor Neuron 1, Telomeric Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMNP Gene

Genomics for SMNP Gene

Regulatory Elements for SMNP Gene

Enhancers for SMNP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F020318 1 Ensembl ENCODE 0.4 -10.8 -10762 3.4 PKNOX1 INSM2 KLF17 FEZF1 ZNF2 ZNF335 ZNF366 SCRT2 ZNF391 FOS SMNP GC09M020265
GH09F020307 0.4 ENCODE 0.3 -23.5 -23511 0.2 CTCF SMNP GC09M020265
GH09F020314 0.8 Ensembl ENCODE 0.3 -15.7 -15735 1.6 JUND TAF1 L3MBTL2 FOS SMNP GC09M020265
GH09F020301 0.6 ENCODE 0.3 -28.2 -28195 3.1 POU5F1 KDM1A MAFK SMNP GC09M020265
GH09F020297 1.2 Ensembl ENCODE 0.3 -33.6 -33637 0.9 BHLHE40 NR3C1 FOS SMNP GC09M020265
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SMNP on UCSC Golden Path with GeneCards custom track

Genomic Location for SMNP Gene

Chromosome:
9
Start:
20,331,408 bp from pter
End:
20,332,377 bp from pter
Size:
970 bases
Orientation:
Plus strand

Genomic View for SMNP Gene

Genes around SMNP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMNP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMNP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMNP Gene

Proteins for SMNP Gene

Post-translational modifications for SMNP Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMNP Gene

Domains & Families for SMNP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMNP Gene

Function for SMNP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMNP Gene

Localization for SMNP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMNP Gene

Pathways & Interactions for SMNP Gene

SuperPathways for SMNP Gene

No Data Available

Interacting Proteins for SMNP Gene

Gene Ontology (GO) - Biological Process for SMNP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMNP Gene

Transcripts for SMNP Gene

mRNA/cDNA for SMNP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMNP Gene

No ASD Table

Relevant External Links for SMNP Gene

GeneLoc Exon Structure for
SMNP

Expression for SMNP Gene

mRNA expression in normal human tissues for SMNP Gene

genes like me logo Genes that share expression patterns with SMNP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SMNP Gene

Orthologs for SMNP Gene

Evolution for SMNP Gene

ENSEMBL:
Gene Tree for SMNP (if available)
TreeFam:
Gene Tree for SMNP (if available)

No data available for Orthologs for SMNP Gene

Paralogs for SMNP Gene

No data available for Paralogs for SMNP Gene

Variants for SMNP Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for SMNP Gene

Disorders for SMNP Gene

No disorders were found for SMNP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMNP Gene

Publications for SMNP Gene

No publications were found for SMNP Gene.

Products for SMNP Gene

Sources for SMNP Gene

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