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Aliases for SMIM2-IT1 Gene

Subcategory (RNA class) for SMIM2-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SMIM2-IT1 Gene

  • SMIM2 Intronic Transcript 1 2 3
  • SMIM2 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • C13orf44 Intronic Transcript 1 (Non-Protein Coding) 2
  • C13orf44-IT1 3

External Ids for SMIM2-IT1 Gene

ORGUL Members for SMIM2-IT1 Gene

Previous HGNC Symbols for SMIM2-IT1 Gene

  • C13orf44-IT1

Previous GeneCards Identifiers for SMIM2-IT1 Gene

  • GC13M044724

Summaries for SMIM2-IT1 Gene

GeneCards Summary for SMIM2-IT1 Gene

SMIM2-IT1 (SMIM2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMIM2-IT1 Gene

Genomics for SMIM2-IT1 Gene

Genomic Location for SMIM2-IT1 Gene

Start:
44,146,470 bp from pter
End:
44,158,222 bp from pter
Size:
11,753 bases
Orientation:
Minus strand

Genomic View for SMIM2-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SMIM2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMIM2-IT1 Gene

No data available for Regulatory Elements for SMIM2-IT1 Gene

Proteins for SMIM2-IT1 Gene

Post-translational modifications for SMIM2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMIM2-IT1 Gene

Domains for SMIM2-IT1 Gene

Gene Families for SMIM2-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SMIM2-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMIM2-IT1 Gene

Function for SMIM2-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SMIM2-IT1 Gene

Localization for SMIM2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMIM2-IT1 Gene

Pathways for SMIM2-IT1 Gene

SuperPathways for SMIM2-IT1 Gene

No Data Available

Interacting Proteins for SMIM2-IT1 Gene

Gene Ontology (GO) - Biological Process for SMIM2-IT1 Gene

None

No data available for Pathways by source for SMIM2-IT1 Gene

Transcripts for SMIM2-IT1 Gene

mRNA/cDNA for SMIM2-IT1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SMIM2-IT1 Gene

SMIM2 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SMIM2-IT1 Gene

No ASD Table

Relevant External Links for SMIM2-IT1 Gene

GeneLoc Exon Structure for
SMIM2-IT1
ECgene alternative splicing isoforms for
SMIM2-IT1

Expression for SMIM2-IT1 Gene

mRNA expression in normal human tissues for SMIM2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for SMIM2-IT1 Gene

This gene is overexpressed in Testis (32.5) and Muscle - Skeletal (6.6).

SOURCE GeneReport for Unigene cluster for SMIM2-IT1 Gene Hs.652552

genes like me logo Genes that share expressions with SMIM2-IT1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SMIM2-IT1 Gene

Orthologs for SMIM2-IT1 Gene

Evolution for SMIM2-IT1 Gene

ENSEMBL:
Gene Tree for SMIM2-IT1 (if available)
TreeFam:
Gene Tree for SMIM2-IT1 (if available)

No data available for Orthologs for SMIM2-IT1 Gene

Paralogs for SMIM2-IT1 Gene

No data available for Paralogs for SMIM2-IT1 Gene

Variants for SMIM2-IT1 Gene

Relevant External Links for SMIM2-IT1 Gene

HapMap Linkage Disequilibrium report
SMIM2-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SMIM2-IT1 Gene

Disorders for SMIM2-IT1 Gene

No disorders were found for SMIM2-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for SMIM2-IT1 Gene

Publications for SMIM2-IT1 Gene

No publications were found for SMIM2-IT1 Gene.

Products for SMIM2-IT1 Gene

Sources for SMIM2-IT1 Gene

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