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Aliases for SMIM2-AS1 Gene

Subcategory (RNA class) for SMIM2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SMIM2-AS1 Gene

  • SMIM2 Antisense RNA 1 2 3 5
  • SMIM2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C13orf44 Antisense RNA 1 (Non-Protein Coding) 2
  • C13orf44-AS1 3
  • C3orf81-AS1 3

External Ids for SMIM2-AS1 Gene

Previous HGNC Symbols for SMIM2-AS1 Gene

  • C13orf44-AS1

Previous GeneCards Identifiers for SMIM2-AS1 Gene

  • GC13P044719

Summaries for SMIM2-AS1 Gene

GeneCards Summary for SMIM2-AS1 Gene

SMIM2-AS1 (SMIM2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMIM2-AS1 Gene

Genomics for SMIM2-AS1 Gene

Regulatory Elements for SMIM2-AS1 Gene

Enhancers for SMIM2-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SMIM2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SMIM2-AS1 Gene

Chromosome:
13
Start:
44,110,451 bp from pter
End:
44,240,517 bp from pter
Size:
130,067 bases
Orientation:
Plus strand

Genomic View for SMIM2-AS1 Gene

Genes around SMIM2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMIM2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMIM2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMIM2-AS1 Gene

Proteins for SMIM2-AS1 Gene

Post-translational modifications for SMIM2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMIM2-AS1 Gene

Domains & Families for SMIM2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMIM2-AS1 Gene

Function for SMIM2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMIM2-AS1 Gene

Localization for SMIM2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMIM2-AS1 Gene

Pathways & Interactions for SMIM2-AS1 Gene

SuperPathways for SMIM2-AS1 Gene

No Data Available

Interacting Proteins for SMIM2-AS1 Gene

Gene Ontology (GO) - Biological Process for SMIM2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMIM2-AS1 Gene

Drugs & Compounds for SMIM2-AS1 Gene

No Compound Related Data Available

Transcripts for SMIM2-AS1 Gene

mRNA/cDNA for SMIM2-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMIM2-AS1 Gene

No ASD Table

Relevant External Links for SMIM2-AS1 Gene

GeneLoc Exon Structure for
SMIM2-AS1
ECgene alternative splicing isoforms for
SMIM2-AS1

Expression for SMIM2-AS1 Gene

mRNA expression in normal human tissues for SMIM2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SMIM2-AS1 Gene

This gene is overexpressed in Testis (x7.1), Kidney - Cortex (x7.0), and Liver (x5.3).
genes like me logo Genes that share expression patterns with SMIM2-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SMIM2-AS1 Gene

Orthologs for SMIM2-AS1 Gene

Evolution for SMIM2-AS1 Gene

ENSEMBL:
Gene Tree for SMIM2-AS1 (if available)
TreeFam:
Gene Tree for SMIM2-AS1 (if available)

No data available for Orthologs for SMIM2-AS1 Gene

Paralogs for SMIM2-AS1 Gene

No data available for Paralogs for SMIM2-AS1 Gene

Variants for SMIM2-AS1 Gene

Relevant External Links for SMIM2-AS1 Gene

HapMap Linkage Disequilibrium report
SMIM2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMIM2-AS1 Gene

Disorders for SMIM2-AS1 Gene

Relevant External Links for SMIM2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SMIM2-AS1

No disorders were found for SMIM2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SMIM2-AS1 Gene

Publications for SMIM2-AS1 Gene

  1. Genome-wide contribution of genotype by environment interaction to variation of diabetes-related traits. (PMID: 24204828) Zheng J.S. … Lai C.Q. (PLoS ONE 2013) 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for SMIM2-AS1 Gene

Sources for SMIM2-AS1 Gene

Content