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Aliases for SMG6-IT1 Gene

Subcategory (RNA class) for SMG6-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SMG6-IT1 Gene

  • SMG6 Intronic Transcript 1 2 3
  • SMG6 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Chromosome 17 Open Reading Frame 6 2
  • C17orf6 3

External Ids for SMG6-IT1 Gene

ORGUL Members for SMG6-IT1 Gene

Previous HGNC Symbols for SMG6-IT1 Gene

  • C17orf6

Previous GeneCards Identifiers for SMG6-IT1 Gene

  • GC17U901711

Summaries for SMG6-IT1 Gene

GeneCards Summary for SMG6-IT1 Gene

SMG6-IT1 (SMG6 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMG6-IT1 Gene

Genomics for SMG6-IT1 Gene

Genomic Location for SMG6-IT1 Gene

Start:
2,235,713 bp from pter
End:
2,236,086 bp from pter
Size:
374 bases
Orientation:
Minus strand

Genomic View for SMG6-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SMG6-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements and RefSeq DNA sequence for SMG6-IT1 Gene

Proteins for SMG6-IT1 Gene

Post-translational modifications for SMG6-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMG6-IT1 Gene

Domains for SMG6-IT1 Gene

Gene Families for SMG6-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SMG6-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMG6-IT1 Gene

Function for SMG6-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SMG6-IT1 Gene

Localization for SMG6-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMG6-IT1 Gene

Pathways for SMG6-IT1 Gene

SuperPathways for SMG6-IT1 Gene

No Data Available

Interacting Proteins for SMG6-IT1 Gene

Gene Ontology (GO) - Biological Process for SMG6-IT1 Gene

None

No data available for Pathways by source for SMG6-IT1 Gene

Transcripts for SMG6-IT1 Gene

mRNA/cDNA for SMG6-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMG6-IT1 Gene

No ASD Table

Relevant External Links for SMG6-IT1 Gene

GeneLoc Exon Structure for
SMG6-IT1
ECgene alternative splicing isoforms for
SMG6-IT1

Expression for SMG6-IT1 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SMG6-IT1 Gene

Orthologs for SMG6-IT1 Gene

Evolution for SMG6-IT1 Gene

ENSEMBL:
Gene Tree for SMG6-IT1 (if available)
TreeFam:
Gene Tree for SMG6-IT1 (if available)

No data available for Orthologs for SMG6-IT1 Gene

Paralogs for SMG6-IT1 Gene

No data available for Paralogs for SMG6-IT1 Gene

Variants for SMG6-IT1 Gene

Relevant External Links for SMG6-IT1 Gene

HapMap Linkage Disequilibrium report
SMG6-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SMG6-IT1 Gene

Disorders for SMG6-IT1 Gene

No disorders were found for SMG6-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for SMG6-IT1 Gene

Publications for SMG6-IT1 Gene

No publications were found for SMG6-IT1 Gene.

Products for SMG6-IT1 Gene

Sources for SMG6-IT1 Gene

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