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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SMG5 Gene

protein-coding   GIFtS: 51
GCID: GC01M156219

smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)

  Search for SMG5
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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Smg-5 Homolog, Nonsense Mediated MRNA Decay Factor (C. Elegans)1 2     LPTS-Interacting Protein2 3
EST1B1 2 3 5     RP11-54H19.71
LPTS-RP11 2 3     EST1 Telomerase Component Homolog B2
KIAA10891 3 5     Est1p-Like Protein B2
LPTSRP11 2     Ever Shorter Telomeres 1B2
SMG-51 2     LPTS Interacting Protein2
EST1-Like Protein B2 3     Protein SMG52
HSMG-51     SMG-5 Homolog3

External Ids:    HGNC: 246441   Entrez Gene: 233812   Ensembl: ENSG000001989527   OMIM: 6109625   UniProtKB: Q9UPR33   

Export aliases for SMG5 gene to outside databases

Previous GC identifers: GC01M154485 GC01M127580


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SMG5:
SMG5 is involved in nonsense-mediated mRNA decay (Ohnishi et al., 2003 (PubMed 14636577)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: SMG5_HUMAN, Q9UPR3
Function: Plays a role in nonsense-mediated mRNA decay. Does not have RNase activity by itself. Promotes
dephosphorylation of UPF1. Together with SMG7 is thought to provide a link to the mRNA degradation machinery involving
exonucleolytic pathways, and to serve as an adapter for UPF1 to protein phosphatase 2A (PP2A), thereby triggering UPF1
dephosphorylation. Necessary for TERT activity

Gene Wiki entry for SMG5


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004487.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SMG5 gene promoter:
         SRF   SRF (504 AA)   Lmo2   Nkx2-5   CUTL1   YY1   Max   PPAR-alpha   PPAR-gamma1   HOXA5   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSMG5 promoter sequence
   Search SABiosciences Chromatin IP Primers for SMG5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SMG5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q21.2   Ensembl cytogenetic band:  1q22   HGNC cytogenetic band: 1q21

SMG5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SMG5 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M156219:  view genomic region     (about GC identifiers)

Start:
156,219,015 bp from pter      End:
156,252,620 bp from pter
Size:
33,606 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SMG5_HUMAN, Q9UPR3 (See protein sequence)
Recommended Name: Protein SMG5  
Size: 1016 amino acids; 113928 Da
Subunit: Interacts with TERT, PPP2CA and SMG1. Part of a complex that contains SMG1, SMG5, SMG7, PPP2CA, a short
isoform of UPF3A (isoform UPF3AS, but not isoform UPF3AL) and phosphorylated UPF1. Not detected in complexes that
contain unphosphorylated UPF1
Subcellular location: Cytoplasm. Nucleus. Note=Predominantly cytoplasmic, and nuclear. Shuttles between nucleus and
cytoplasm. Detected in cytoplasmic mRNA decay bodies
Sequence caution: Sequence=BAA83041.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;
1 PDB 3D structure from and Proteopedia for SMG5:
2HWY (3D)    
Secondary accessions: D3DVB7 Q5QJE7 Q659C7 Q8IXC0 Q8IY09 Q96IJ7

Explore the universe of human proteins at neXtProt for SMG5: NX_Q9UPR3

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UPR3

  • SMG5 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_056142.2  
    ENSEMBL proteins: 
     ENSP00000355261   ENSP00000400574   ENSP00000357250  
    Reactome Protein details: Q9UPR3
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    Uscn Proteins for SMG5

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA14636577
    GO:0005737cytoplasm IDA14636577
    GO:0005829cytosol TAS--


    SMG5 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SMG5 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR018834 DNA/RNA-bd_Est1-type
     IPR006596 PINc_nuc-bd
     IPR019458 EST1

    Graphical View of Domain Structure for InterPro Entry Q9UPR3

    ProtoNet protein and cluster: Q9UPR3

    UniProtKB/Swiss-Prot: SMG5_HUMAN, Q9UPR3
    Similarity: Contains 1 PINc domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SMG5_HUMAN, Q9UPR3
    Function: Plays a role in nonsense-mediated mRNA decay. Does not have RNase activity by itself. Promotes
    dephosphorylation of UPF1. Together with SMG7 is thought to provide a link to the mRNA degradation machinery involving
    exonucleolytic pathways, and to serve as an adapter for UPF1 to protein phosphatase 2A (PP2A), thereby triggering UPF1
    dephosphorylation. Necessary for TERT activity

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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI--
    GO:0051721protein phosphatase 2A binding IDA14636577


    SMG5 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/7 super-pathways (see all 7About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Synthesis of PB1-F2
    SMG6 Cleaves mRNA with Premature Termination Codon0.80
    Nonsense Mediated Decay Enhanced by the Exon Junction Complex0.77
    Nonsense-Mediated Decay0.77
    Phosphorylated UPF1 Recruits SMG5, SMG7, SMG6, and PP2A0.77
    2Metabolism of mRNA
    Metabolism of mRNA1.00
    Metabolism of RNA0.92
    3Decay of mRNA in SMG6:SMG5:SMG7:mRNA Complex
    Decay of mRNA in SMG6:SMG5:SMG7:mRNA Complex1.00
    4Signaling events mediated by HDAC Class I
    Signaling events mediated by HDAC Class I1.00
    5Regulation of Telomerase
    Regulation of Telomerase1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for SMG5 
        Regulation of Telomerase
    Signaling events mediated by HDAC Class I

    5/8        Reactome Pathways for SMG5 (see all 8)
        Decay of mRNA in SMG6:SMG5:SMG7:mRNA Complex
    Nonsense-Mediated Decay
    SMG6 Cleaves mRNA with Premature Termination Codon
    Nonsense Mediated Decay Enhanced by the Exon Junction Complex
    Phosphorylated UPF1 Recruits SMG5, SMG7, SMG6, and PP2A


    1         Kegg Pathway  (Kegg details for SMG5):
        mRNA surveillance pathway


    SMG5 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SMG5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/142 Interacting proteins for SMG5 (Q9UPR31, 2, 3 ENSP000003552614) via UniProtKB, MINT, STRING, and/or I2D (see all 142)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UPF1Q92900-21, ENSP000002628034EBI-3400861,EBI-373492 I2D: score=1 STRING: ENSP00000262803
    SMG7Q925402, 3, ENSP000003407664MINT-8415355 I2D: score=3 STRING: ENSP00000340766
    SMG1Q96Q153, ENSP000004025154I2D: score=2 STRING: ENSP00000402515
    SMG6Q86US83, ENSP000002630734I2D: score=1 STRING: ENSP00000263073
    TERTO147463, ENSP000003095724I2D: score=2 STRING: ENSP00000309572
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006406mRNA export from nucleus TAS16488880
    GO:0010467gene expression TAS--
    GO:0016070RNA metabolic process TAS--
    GO:0016071mRNA metabolic process TAS--


    SMG5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SMG5
    Search CenterWatch for drugs/clinical trials and news about SMG5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SMG5 gene: 
    NM_015327.2  

    Unigene Cluster for SMG5:

    Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
    Hs.516837  [show with all ESTs]
    Unigene Representative Sequence: BC038296
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000361813(uc001foc.4) ENST00000420555 ENST00000368267 ENST00000462362
    ENST00000476954 ENST00000473643 ENST00000468993 ENST00000489907

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    hsa-miR-3678-3p hsa-miR-1321 hsa-miR-1184 hsa-miR-654-5p hsa-miR-4293 hsa-miR-4309 hsa-miR-761 hsa-miR-877
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    Additional cDNA sequence: 

    AB029012.2 AB085691.1 AK025988.1 AK026395.1 AK027486.1 AK092183.1 AL137738.1 AY168922.1 
    AY336728.1 BC007292.1 BC007453.2 BC038296.1 CR933677.1 

    20 DOTS entries:

    DT.442532  DT.40106647  DT.97847598  DT.92447184  DT.95122520  DT.100661546  DT.121384731  DT.75141513 
    DT.97847599  DT.100037536  DT.100795979  DT.100795987  DT.121610897  DT.40106648  DT.91669724  DT.92447180 
    DT.92447182  DT.97768450  DT.121609976  DT.40201439 

    24/312 AceView cDNA sequences (see all 312):

    BP378210 AA306366 CK000707 BM728292 BQ691980 BQ433906 AI953869 AW089787 
    CA411664 BE838744 AI682519 BU527452 BM808648 BU556974 BQ945966 AW168068 
    BE550730 BM800307 BE878104 AI022142 BE298449 AB085691 AW000913 BM800105 

    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for SMG5 (see all 9)    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19a · 19b · 19c ^ 20 ^
    SP1:                                                                                      -                       -                       -                     
    SP2:                                                                          -     -     -     -     -           -                                             
    SP3:                                                                                                                                      -                     
    SP4:                                                                                -     -                                                                     
    SP5:                                                                                                                                                            

    ExUns: 21 ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26a · 26b · 26c
    SP1:                    -                                 
    SP2:                                                      
    SP3:                                                      
    SP4:                                                      
    SP5:                                                      


    ECgene alternative splicing isoforms for SMG5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SMG5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AATAGCTCAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See SMG5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SMG5

    SOURCE GeneReport for Unigene cluster: Hs.516837

    UniProtKB/Swiss-Prot: SMG5_HUMAN, Q9UPR3
    Tissue specificity: Ubiquitous

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SMG5 gene from 6/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Smg51 , 5 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) less1, 5 88.77(n)1
    93.5(a)1
      3 (38.80 cM)5
    2295121  NM_178246.31  NP_839977.21 
     883362605 
    chicken
    (Gallus gallus)
    Aves SMG51 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) less 75.63(n)
    80.53(a)
      425473  XM_423228.3  XP_423228.3 
    lizard
    (Anolis carolinensis)
    Reptilia SMG56
    --
    --
    81(a)
    69(a)
    many → 1
    many → 1
    GL344710.1(3910-19557)
    GL344815.1(1602-15707)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.165352 Xenopus laevis transcribed sequences 79.45(n)    BG812790.1 
    zebrafish
    (Danio rerio)
    Actinopterygii smg51 Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) less 67(n)
    69.22(a)
      553261  NM_001024923.1  NP_001020094.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Smg51 CG8954-PA 43.99(n)
    30.72(a)
      34804  NM_135841.4  NP_609685.1 


    ENSEMBL Gene Tree for SMG5 (if available)
    TreeFam Gene Tree for SMG5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SMG5 gene
    SMG72  SMG62  

    SMG5 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for SMG5
    PGOHUM00000242487 PGOHUM00000249778


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/641 NCBI SNPs in SMG5 are shown (see all 641    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs112644611,2
    C,F,A,--156218642(+) GATCCG/ACCCGC 3 -- us2k1 int14Minor allele frequency- A:0.38WA NA CSA 8
    rs1881045951,2
    --156218675(+) TACAGA/GCGTGA 3 -- int1 us2k10--------
    rs1898626921,2
    --156218686(+) GCCACC/TACGCC 3 -- us2k1 int10--------
    rs1821657001,2
    --156218692(+) ACGCCC/TGGCCA 3 -- us2k1 int10--------
    rs22411061,2
    C,F,A,H,--156218910(-) GGATGG/CAACAG 3 -- us2k1 int118Minor allele frequency- C:0.18EA NS NA WA 3114
    rs1445761511,2
    --156219000(+) CAGGCA/GCCAGG 3 -- us2k1 int10--------
    rs1480625341,2
    --156219078(+) AGTGGC/GGTGAC 3 -- us2k1 ut310--------
    rs561186601,2
    C--156219081(+) GGGGTA/GACTCC 3 -- us2k1 ut310--------
    rs1879560391,2
    --156219162(+) ACAGCA/TTGGGA 3 -- ut31 us2k10--------
    rs2006205041,2
    --156219211(+) ACCCT-/CCACCC 3 -- ut31 us2k10--------

    HapMap Linkage Disequilibrium report for SMG5 (156219015 - 156252620 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for SMG5: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SMG5
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SMG5 for disorders           About MalaCards

    SMG5 for disorders           About GeneDecksing

    OMIM gene information: 610962    OMIM disorders: --


    Export disorders for SMG5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SMG5 gene, integrated from 9 sources (see all 18):
    (articles sorted by number of sources associating them with SMG5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Functional conservation of the telomerase protein Est1p in humans. (PubMed id 12699629)1, 2, 3 Snow B.E....Harrington L. (2003)
    2. SMG7 acts as a molecular link between mRNA surveillance and mRNA decay. (PubMed id 15546618)1, 2, 9 Unterholzner L. and Izaurralde E. (2004)
    3. Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7. (PubMed id 14636577)1, 2, 9 Ohnishi T.... Ohno S. (2003)
    4. The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
    5. Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex. (PubMed id 17053788)1, 2 Glavan F.... Conti E. (2006)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. A human homolog of yeast est1 associates with telomerase and uncaps chromosome ends when overexpressed. (PubMed id 12676087)1, 3 Reichenbach P....Lingner J. (2003)
    8. Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones. (PubMed id 12168954)1, 2 Nakajima D.... Nagase T. (2002)
    9. Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10470851)1, 2 Kikuno R....Ohara O. (1999)
    10. SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway. (PubMed id 15721257)1, 9 Fukuhara N....Conti E. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23381 HGNC: 24644 AceView: EST1B Ensembl:ENSG00000198952 euGenes: HUgn23381
    ECgene: SMG5 Kegg: 23381 H-InvDB: SMG5

    (According to HUGE)
    About This Section
    HUGE: KIAA1089

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SMG5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SMG5 gene:
    Search GeneIP for patents involving SMG5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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