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Aliases for SMG1P5 Gene

Aliases for SMG1P5 Gene

  • SMG1 Pseudogene 5 2 3

External Ids for SMG1P5 Gene

Summaries for SMG1P5 Gene

GeneCards Summary for SMG1P5 Gene

SMG1P5 (SMG1 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMG1P5 Gene

Genomics for SMG1P5 Gene

Genomic Location for SMG1P5 Gene

30,267,553 bp from pter
30,335,374 bp from pter
67,822 bases
Minus strand

Genomic View for SMG1P5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SMG1P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMG1P5 Gene

No data available for Regulatory Elements for SMG1P5 Gene

Proteins for SMG1P5 Gene

Post-translational modifications for SMG1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMG1P5 Gene

Domains for SMG1P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMG1P5 Gene

Function for SMG1P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SMG1P5 Gene

Localization for SMG1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMG1P5 Gene

Pathways for SMG1P5 Gene

SuperPathways for SMG1P5 Gene

No Data Available

Interacting Proteins for SMG1P5 Gene

Gene Ontology (GO) - Biological Process for SMG1P5 Gene


No data available for Pathways by source for SMG1P5 Gene

Transcripts for SMG1P5 Gene

mRNA/cDNA for SMG1P5 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMG1P5 Gene

No ASD Table

Relevant External Links for SMG1P5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SMG1P5 Gene

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SMG1P5 Gene

Orthologs for SMG1P5 Gene

Evolution for SMG1P5 Gene

Gene Tree for SMG1P5 (if available)
Gene Tree for SMG1P5 (if available)

No data available for Orthologs for SMG1P5 Gene

Paralogs for SMG1P5 Gene

No data available for Paralogs for SMG1P5 Gene

Variants for SMG1P5 Gene

Sequence variations from dbSNP and Humsavar for SMG1P5 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs1060187 -- 30,283,236(-) AGAAA(C/G)AAACA intron-variant
rs1060188 -- 30,283,232(-) agaaa(C/G)aaaga intron-variant
rs1137294 -- 30,283,260(-) tcaaa(A/G)gaaaa intron-variant
rs2098729 -- 30,303,336(+) CAATG(A/T)CTGAG intron-variant
rs2911213 -- 30,313,173(+) tgatc(C/T)gccca intron-variant

Relevant External Links for SMG1P5 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SMG1P5 Gene

Disorders for SMG1P5 Gene

No disorders were found for SMG1P5 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SMG1P5 Gene

Publications for SMG1P5 Gene

  1. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus B.J. … Adams M.D. (Genomics 1999) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. (PMID: 15342556) Suzuki Y. … Sugano S. (Genome Res. 2004) 3

Products for SMG1P5 Gene

Sources for SMG1P5 Gene

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