Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SMG1P2 Gene

Aliases for SMG1P2 Gene

  • SMG1 Pseudogene 2 2 3

External Ids for SMG1P2 Gene

Summaries for SMG1P2 Gene

GeneCards Summary for SMG1P2 Gene

SMG1P2 (SMG1 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMG1P2 Gene

Genomics for SMG1P2 Gene

Genomic Location for SMG1P2 Gene

Start:
29,527,568 bp from pter
End:
29,594,966 bp from pter
Size:
67,399 bases
Orientation:
Minus strand

Genomic View for SMG1P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SMG1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMG1P2 Gene

No data available for Regulatory Elements for SMG1P2 Gene

Proteins for SMG1P2 Gene

Post-translational modifications for SMG1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMG1P2 Gene

Domains for SMG1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMG1P2 Gene

Function for SMG1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SMG1P2 Gene

Localization for SMG1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMG1P2 Gene

Pathways for SMG1P2 Gene

SuperPathways for SMG1P2 Gene

No Data Available

Interacting Proteins for SMG1P2 Gene

Gene Ontology (GO) - Biological Process for SMG1P2 Gene

None

No data available for Pathways by source for SMG1P2 Gene

Transcripts for SMG1P2 Gene

mRNA/cDNA for SMG1P2 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMG1P2 Gene

No ASD Table

Relevant External Links for SMG1P2 Gene

GeneLoc Exon Structure for
SMG1P2
ECgene alternative splicing isoforms for
SMG1P2

Expression for SMG1P2 Gene

mRNA expression in normal human tissues for SMG1P2 Gene

genes like me logo Genes that share expressions with SMG1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SMG1P2 Gene

Orthologs for SMG1P2 Gene

Evolution for SMG1P2 Gene

ENSEMBL:
Gene Tree for SMG1P2 (if available)
TreeFam:
Gene Tree for SMG1P2 (if available)

No data available for Orthologs for SMG1P2 Gene

Paralogs for SMG1P2 Gene

No data available for Paralogs for SMG1P2 Gene

Variants for SMG1P2 Gene

Sequence variations from dbSNP and Humsavar for SMG1P2 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs2521548 -- 29,554,878(-) TCAGC(A/G)CTAAT nc-transcript-variant
rs56147602 -- 29,558,077(+) AAAAA(-/A)TCTTA intron-variant
rs62035654 -- 29,527,397(+) TAAGA(C/T)GCTGT downstream-variant-500B
rs62035655 -- 29,528,143(+) AATCC(A/G)CCTAA intron-variant
rs62035658 -- 29,548,036(+) GCAAC(A/G)GAGTG intron-variant

Relevant External Links for SMG1P2 Gene

HapMap Linkage Disequilibrium report
SMG1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SMG1P2 Gene

Disorders for SMG1P2 Gene

No disorders were found for SMG1P2 Gene.

No data available for UniProtKB/Swiss-Prot for SMG1P2 Gene

Publications for SMG1P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SMG1P2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SMG1P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SMG1P2
    • Block miRNA regulation of SMG1P2 using miScript Target Protectors

    Sources for SMG1P2 Gene

    Back to Top

    Content