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Aliases for SMCR2 Gene

Subcategory (RNA class) for SMCR2 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SMCR2 Gene

  • Smith-Magenis Syndrome Chromosome Region, Candidate 2 (Non-Protein Coding) 2 3
  • Smith-Magenis Syndrome Chromosome Region, Candidate 2 2
  • TCONS_00025215 3

External Ids for SMCR2 Gene

ORGUL Members for SMCR2 Gene

Summaries for SMCR2 Gene

GeneCards Summary for SMCR2 Gene

SMCR2 (Smith-Magenis Syndrome Chromosome Region, Candidate 2 (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class. Diseases associated with SMCR2 include smith-magenis syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMCR2 Gene

Genomics for SMCR2 Gene

Genomic Location for SMCR2 Gene

Start:
17,674,026 bp from pter
End:
17,677,688 bp from pter
Size:
3,663 bases
Orientation:
Minus strand

Genomic View for SMCR2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SMCR2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMCR2 Gene

No data available for Regulatory Elements for SMCR2 Gene

Proteins for SMCR2 Gene

Post-translational modifications for SMCR2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMCR2 Gene

Domains for SMCR2 Gene

Gene Families for SMCR2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with SMCR2: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SMCR2 Gene

Function for SMCR2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SMCR2 Gene

Localization for SMCR2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SMCR2 Gene COMPARTMENTS Subcellular localization image for SMCR2 gene
Compartment Confidence
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for SMCR2 Gene

Pathways for SMCR2 Gene

SuperPathways for SMCR2 Gene

No Data Available

Interacting Proteins for SMCR2 Gene

Gene Ontology (GO) - Biological Process for SMCR2 Gene

None

No data available for Pathways by source for SMCR2 Gene

Transcripts for SMCR2 Gene

mRNA/cDNA for SMCR2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMCR2 Gene

No ASD Table

Relevant External Links for SMCR2 Gene

GeneLoc Exon Structure for
SMCR2
ECgene alternative splicing isoforms for
SMCR2

Expression for SMCR2 Gene

mRNA expression in normal human tissues for SMCR2 Gene

mRNA differential expression in normal tissues according to GTEx for SMCR2 Gene

This gene is overexpressed in Testis (10.6).
genes like me logo Genes that share expressions with SMCR2: view

Orthologs for SMCR2 Gene

Evolution for SMCR2 Gene

ENSEMBL:
Gene Tree for SMCR2 (if available)
TreeFam:
Gene Tree for SMCR2 (if available)

No data available for Orthologs for SMCR2 Gene

Paralogs for SMCR2 Gene

No data available for Paralogs for SMCR2 Gene

Variants for SMCR2 Gene

Relevant External Links for SMCR2 Gene

HapMap Linkage Disequilibrium report
SMCR2

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SMCR2 Gene

Disorders for SMCR2 Gene

(1) MalaCards Diseases for SMCR2 Gene

Search for SMCR2 Gene in MalaCards »
genes like me logo Genes that share disorders with SMCR2: view

No data available for UniProtKB/Swiss-Prot for SMCR2 Gene

Publications for SMCR2 Gene

  1. Genes in a refined Smith-Magenis syndrome critical deletion interval on chromosome 17p11.2 and the syntenic region of the mouse. (PMID: 11997338) Bi W. … Lupski J.R. (Genome Res. 2002) 2 3

Products for SMCR2 Gene

Sources for SMCR2 Gene

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