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SMARCE1P5 Gene(Pseudogene)

SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 5

GCID:
GC13P044594
GIFtS:
10

Aliases for SMARCE1P5 Gene

Aliases for SMARCE1P5 Gene

  • SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 5 2 3 5

External Ids for SMARCE1P5 Gene

Previous GeneCards Identifiers for SMARCE1P5 Gene

  • GC13P045170

Summaries for SMARCE1P5 Gene

GeneCards Summary for SMARCE1P5 Gene

SMARCE1P5 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 5) is a Pseudogene.

Additional gene information for SMARCE1P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMARCE1P5 Gene

Genomics for SMARCE1P5 Gene

Regulatory Elements for SMARCE1P5 Gene

Enhancers for SMARCE1P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H044712 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12 +119.6 119576 3 ZFP64 RAD21 ZNF354C FOS RCOR1 ZNF202 ZNF680 ZC3H11A CEBPB REST GPALPP1 COG3 ERICH6B RN7SL49P TPT1-AS1 RCN1P2 SMARCE1P5 CCDC122 KCTD4 GC13P044709
GH13H044571 1.4 ENCODE dbSUPER 12.3 -19.0 -18982 7 HDGF ZFP64 SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 ZNF766 ZNF143 COG3 SMARCE1P5 TSC22D1-AS1 ENSG00000225727
GH13H044757 1.7 FANTOM5 Ensembl ENCODE dbSUPER 4.6 +164.4 164448 3 PKNOX1 FOXA2 ZSCAN4 INSM2 KLF17 FEZF1 RAD21 ZNF2 ZSCAN5C SCRT2 LINC00330 TSC22D1 SMARCE1P5 LOC105370185
GH13H044762 1.5 FANTOM5 Ensembl ENCODE dbSUPER 4.6 +169.7 169664 4 SOX13 ZNF687 EBF1 RARA TEAD3 NFIL3 RCOR1 ATF7 WT1 MYC LINC00330 SMARCE1P5 LOC105370185
GH13H044591 0.2 ENCODE 0.7 -3.3 -3279 0 GC13M044584 SMARCE1P5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SMARCE1P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for SMARCE1P5 Gene

Chromosome:
13
Start:
44,594,858 bp from pter
End:
44,596,149 bp from pter
Size:
1,292 bases
Orientation:
Plus strand

Genomic View for SMARCE1P5 Gene

Genes around SMARCE1P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMARCE1P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMARCE1P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMARCE1P5 Gene

Proteins for SMARCE1P5 Gene

Post-translational modifications for SMARCE1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMARCE1P5 Gene

Domains & Families for SMARCE1P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMARCE1P5 Gene

Function for SMARCE1P5 Gene

Phenotypes From GWAS Catalog for SMARCE1P5 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SMARCE1P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMARCE1P5 Gene

Localization for SMARCE1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMARCE1P5 Gene

Pathways & Interactions for SMARCE1P5 Gene

SuperPathways for SMARCE1P5 Gene

No Data Available

Interacting Proteins for SMARCE1P5 Gene

Gene Ontology (GO) - Biological Process for SMARCE1P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMARCE1P5 Gene

Drugs & Compounds for SMARCE1P5 Gene

No Compound Related Data Available

Transcripts for SMARCE1P5 Gene

mRNA/cDNA for SMARCE1P5 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SMARCE1P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SMARCE1P5 Gene

No ASD Table

Relevant External Links for SMARCE1P5 Gene

GeneLoc Exon Structure for
SMARCE1P5
ECgene alternative splicing isoforms for
SMARCE1P5

Expression for SMARCE1P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMARCE1P5 Gene

mRNA differential expression in normal tissues according to GTEx for SMARCE1P5 Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (x4.6), Brain - Putamen (basal ganglia) (x4.6), and Brain - Nucleus accumbens (basal ganglia) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of SMARCE1P5 Gene:

SMARCE1P5
genes like me logo Genes that share expression patterns with SMARCE1P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMARCE1P5 Gene

Orthologs for SMARCE1P5 Gene

Evolution for SMARCE1P5 Gene

ENSEMBL:
Gene Tree for SMARCE1P5 (if available)
TreeFam:
Gene Tree for SMARCE1P5 (if available)

No data available for Orthologs for SMARCE1P5 Gene

Paralogs for SMARCE1P5 Gene

No data available for Paralogs for SMARCE1P5 Gene

Variants for SMARCE1P5 Gene

Relevant External Links for SMARCE1P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMARCE1P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMARCE1P5 Gene

Disorders for SMARCE1P5 Gene

No disorders were found for SMARCE1P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMARCE1P5 Gene

Publications for SMARCE1P5 Gene

No publications were found for SMARCE1P5 Gene.

Products for SMARCE1P5 Gene

Sources for SMARCE1P5 Gene

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