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Aliases for SMARCE1P5 Gene

Aliases for SMARCE1P5 Gene

  • SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 5 2 3 5

External Ids for SMARCE1P5 Gene

Previous GeneCards Identifiers for SMARCE1P5 Gene

  • GC13P045170

Summaries for SMARCE1P5 Gene

GeneCards Summary for SMARCE1P5 Gene

SMARCE1P5 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMARCE1P5 Gene

Genomics for SMARCE1P5 Gene

Regulatory Elements for SMARCE1P5 Gene

Enhancers for SMARCE1P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F044710 1.5 FANTOM5 Ensembl ENCODE 12.2 +118.4 118400 6.2 TBP ZFP64 SIN3A RAD21 ZNF354C RCOR1 ETV6 FOS ZNF202 ZNF680 RN7SL49P RCN1P2 ERICH6B SMARCE1P5 TSC22D1 CCDC122 KCTD4 GC13P044709 LOC105370185
GH13F044571 1.1 ENCODE 12.4 -19.0 -18982 7.9 HDGF CREB3L1 ZFP64 SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF207 FOS SMARCE1P5 TSC22D1-AS1 ENSG00000225727
GH13F044248 1.1 Ensembl ENCODE 12.1 -345.3 -345286 1.5 ZNF493 ZFP64 FEZF1 RAD21 ZNF366 ZNF354C SCRT2 ZNF202 ZNF680 ZNF654 RN7SL49P SMARCE1P5 SERP2 CCDC122 ENSG00000230731 GC13M044260
GH13F044141 1.1 ENCODE 12.1 -452.4 -452363 3.6 PKNOX1 ZFP64 SIN3A ARID4B DMAP1 YY1 ZNF143 FOS SP3 SP5 SMIM2-AS1 RN7SL49P SMARCE1P5 CCDC122 LINC00390 GC13P044121
GH13F044140 1 Ensembl ENCODE 12.1 -454.5 -454458 0.4 ZFP64 ZNF140 ZNF266 RAD21 ZIC2 ZNF664 GATA3 ZNF354C ZNF547 FOS RN7SL49P SMARCE1P5 SMIM2 CCDC122 LINC00390 GC13P044121
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SMARCE1P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for SMARCE1P5 Gene

Chromosome:
13
Start:
44,594,858 bp from pter
End:
44,596,149 bp from pter
Size:
1,292 bases
Orientation:
Plus strand

Genomic View for SMARCE1P5 Gene

Genes around SMARCE1P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMARCE1P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMARCE1P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMARCE1P5 Gene

Proteins for SMARCE1P5 Gene

Post-translational modifications for SMARCE1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMARCE1P5 Gene

Domains & Families for SMARCE1P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMARCE1P5 Gene

Function for SMARCE1P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMARCE1P5 Gene

Localization for SMARCE1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SMARCE1P5 Gene

Pathways & Interactions for SMARCE1P5 Gene

SuperPathways for SMARCE1P5 Gene

No Data Available

Interacting Proteins for SMARCE1P5 Gene

Gene Ontology (GO) - Biological Process for SMARCE1P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMARCE1P5 Gene

Transcripts for SMARCE1P5 Gene

mRNA/cDNA for SMARCE1P5 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMARCE1P5 Gene

No ASD Table

Relevant External Links for SMARCE1P5 Gene

GeneLoc Exon Structure for
SMARCE1P5
ECgene alternative splicing isoforms for
SMARCE1P5

Expression for SMARCE1P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SMARCE1P5 Gene

mRNA differential expression in normal tissues according to GTEx for SMARCE1P5 Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (x4.6), Brain - Putamen (basal ganglia) (x4.6), and Brain - Nucleus accumbens (basal ganglia) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of SMARCE1P5 Gene:

SMARCE1P5
genes like me logo Genes that share expression patterns with SMARCE1P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SMARCE1P5 Gene

Orthologs for SMARCE1P5 Gene

Evolution for SMARCE1P5 Gene

ENSEMBL:
Gene Tree for SMARCE1P5 (if available)
TreeFam:
Gene Tree for SMARCE1P5 (if available)

No data available for Orthologs for SMARCE1P5 Gene

Paralogs for SMARCE1P5 Gene

No data available for Paralogs for SMARCE1P5 Gene

Variants for SMARCE1P5 Gene

Relevant External Links for SMARCE1P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMARCE1P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMARCE1P5 Gene

Disorders for SMARCE1P5 Gene

No disorders were found for SMARCE1P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMARCE1P5 Gene

Publications for SMARCE1P5 Gene

No publications were found for SMARCE1P5 Gene.

Products for SMARCE1P5 Gene

Sources for SMARCE1P5 Gene

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