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Aliases for SMARCE1P2 Gene

Subcategory (RNA class) for SMARCE1P2 Gene

lncRNA

Aliases for SMARCE1P2 Gene

  • SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 2 2 3 5

External Ids for SMARCE1P2 Gene

ORGUL Members for SMARCE1P2 Gene

Previous GeneCards Identifiers for SMARCE1P2 Gene

  • GC06M085140

Summaries for SMARCE1P2 Gene

GeneCards Summary for SMARCE1P2 Gene

SMARCE1P2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily E, Member 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SMARCE1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMARCE1P2 Gene

Genomics for SMARCE1P2 Gene

GeneHancer (GH) Regulatory Elements for SMARCE1P2 Gene

Promoters and enhancers for SMARCE1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I084449 Enhancer 1 UCNEbase 0.4 -18.6 -18600 0.3 PKNOX1 ZSCAN4 INSM2 MZF1 ZNF76 FEZF1 RAD21 YY1 ZNF213 ZNF302 SMARCE1P2 LINC01611
GH06I084361 Enhancer 0.9 UCNEbase 0.2 +69.2 69226 0.2 MEIS2 PKNOX1 CEBPG FEZF1 ZNF213 ATF7 ZNF639 SOX6 DPF2 ZEB2 SMARCE1P2 CEP162
GH06I084466 Enhancer 0.5 ENCODE 0.3 -35.9 -35914 0.9 FOSL1 SP1 JUND FOSL2 RAD21 SMARCE1P2 LINC01611
GH06I084546 Enhancer 1.3 UCNEbase ENCODE 0.1 -116.1 -116108 1.1 HDGF ATF1 SMAD1 ARNT ZNF766 E2F8 ZNF207 ATF7 NCOA1 MBD2 LINC01611 SMARCE1P2
GH06I084521 Enhancer 0.6 ENCODE 0.2 -91.4 -91446 1.3 FOXA2 ZNF189 JUN CEBPG FEZF1 ZEB2 ZNF843 SP1 JUND POLR2A SNAP91 LINC01611 SMARCE1P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SMARCE1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SMARCE1P2 Gene

Genomic Locations for SMARCE1P2 Gene
chr6:84,429,581-84,430,802
(GRCh38/hg38)
Size:
1,222 bases
Orientation:
Minus strand
chr6:85,139,299-85,140,520
(GRCh37/hg19)

Genomic View for SMARCE1P2 Gene

Genes around SMARCE1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMARCE1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMARCE1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMARCE1P2 Gene

Proteins for SMARCE1P2 Gene

Post-translational modifications for SMARCE1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMARCE1P2 Gene

Domains & Families for SMARCE1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMARCE1P2 Gene

Function for SMARCE1P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMARCE1P2 Gene

Localization for SMARCE1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMARCE1P2 Gene

Pathways & Interactions for SMARCE1P2 Gene

SuperPathways for SMARCE1P2 Gene

No Data Available

Interacting Proteins for SMARCE1P2 Gene

Gene Ontology (GO) - Biological Process for SMARCE1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMARCE1P2 Gene

Drugs & Compounds for SMARCE1P2 Gene

No Compound Related Data Available

Transcripts for SMARCE1P2 Gene

mRNA/cDNA for SMARCE1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SMARCE1P2 Gene

No ASD Table

Relevant External Links for SMARCE1P2 Gene

GeneLoc Exon Structure for
SMARCE1P2
ECgene alternative splicing isoforms for
SMARCE1P2

Expression for SMARCE1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMARCE1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SMARCE1P2 Gene:

SMARCE1P2
genes like me logo Genes that share expression patterns with SMARCE1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMARCE1P2 Gene

Orthologs for SMARCE1P2 Gene

Evolution for SMARCE1P2 Gene

ENSEMBL:
Gene Tree for SMARCE1P2 (if available)
TreeFam:
Gene Tree for SMARCE1P2 (if available)

No data available for Orthologs for SMARCE1P2 Gene

Paralogs for SMARCE1P2 Gene

No data available for Paralogs for SMARCE1P2 Gene

Variants for SMARCE1P2 Gene

Additional Variant Information for SMARCE1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMARCE1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMARCE1P2 Gene

Disorders for SMARCE1P2 Gene

No disorders were found for SMARCE1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMARCE1P2 Gene

Publications for SMARCE1P2 Gene

No publications were found for SMARCE1P2 Gene.

Products for SMARCE1P2 Gene

Sources for SMARCE1P2 Gene

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