Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SMAD9 Gene

protein-coding   GIFtS: 63
GCID: GC13M037418

SMAD family member 9

(Previous names: MAD, mothers against decapentaplegic homolog 9 (Drosophila),...)
(Previous symbols: MADH6, MADH9)
 Explore 8 diseases affiliated with
SMAD9 via our new
 Human Malady Compendium 
Biological research products
for SMAD9
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
SMAD Family Member 91 2 3     SMAD8B2
MADH61 2 3 5     Mothers Against Decapentaplegic Homolog 92
MADH91 2 3 5     Mothers Against Decapentaplegic, Drosophila, Homolog Of, 92
MAD Homolog 92 3     SMAD, Mothers Against DPP Homolog 92
MAD, Mothers Against Decapentaplegic Homolog 9 (Drosophila)1     Madh63
SMAD, Mothers Against DPP Homolog 9 (Drosophila)1     Smad93
SMAD82     Mothers Against DPP Homolog 93
SMAD8A2     SMAD 93

External Ids:    HGNC: 67741   Entrez Gene: 40932   Ensembl: ENSG000001206937   OMIM: 6032955   UniProtKB: O151983   

Export aliases for SMAD9 gene to outside databases

Previous GC identifers: GC13M035221 GC13M036320 GC13M018230


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SMAD9:
The protein encoded by this gene is a member of the SMAD family, which transduces signals from TGF-beta family members.
The encoded protein is activated by bone morphogenetic proteins and interacts with SMAD4. Two transcript variants
encoding different isoforms have been found for this gene.(provided by RefSeq, Jan 2010)

UniProtKB/Swiss-Prot: SMAD9_HUMAN, O15198
Function: Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD9 is a
receptor-regulated SMAD (R-SMAD)

Gene Wiki entry for SMAD9 (Mothers against decapentaplegic homolog 9)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000013.10  NC_018924.1  NT_024524.14  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SMAD9 gene promoter:
         HFH-3   AML1a   Lmo2   YY1   FOXI1   SRY   GATA-6   FOXO1a   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSMAD9 promoter sequence
   Search SABiosciences Chromatin IP Primers for SMAD9

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SMAD9


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 13q12-q14   Ensembl cytogenetic band:  13q13.3   HGNC cytogenetic band: 13q12-q14

SMAD9 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SMAD9 gene location

GeneLoc information about chromosome 13         GeneLoc Exon Structure

GeneLoc location for GC13M037418:  view genomic region     (about GC identifiers)

Start:
37,418,968 bp from pter      End:
37,494,902 bp from pter
Size:
75,935 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SMAD9_HUMAN, O15198 (See protein sequence)
Recommended Name: Mothers against decapentaplegic homolog 9  
Size: 467 amino acids; 52493 Da
Subunit: Interaction with the co-SMAD SMAD4. Interacts with PEBP2-alpha subunit
Subcellular location: Cytoplasm (By similarity). Nucleus (By similarity). Note=In the cytoplasm in the absence of
ligand. Migration to the nucleus when complexed with SMAD4 (By similarity)
Secondary accessions: A2A2Y6 O14989 Q5TBA1
Alternative splicing: 2 isoforms:  O15198-1   O15198-2   

Explore the universe of human proteins at neXtProt for SMAD9: NX_O15198

Post-translational modifications:

  • Phosphorylated on serine by BMP (bone morphogenetic proteins) type 1 receptor kinase1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O15198

  • SMAD9 Protein expression data from MOPED and PaxDb:    About this image 
    SMAD9 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001120689.1  NP_005896.1  

    ENSEMBL proteins: 
     ENSP00000382216   ENSP00000239885   ENSP00000369154  
    Reactome Protein details: O15198
    Human Recombinant Protein Products for SMAD9: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: SMAD9
    OriGene Protein Over-expression Lysate: SMAD9
    OriGene Custom Protein Services for SMAD9 
    GenScript Custom Purified and Recombinant Proteins Services for SMAD9
    Novus Biologicals SMAD9 Protein
    Novus Biologicals SMAD9 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SMAD9

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular TAS9256479
    GO:0005634nucleus TAS19018011
    GO:0005654nucleoplasm TAS--
    GO:0005667transcription factor complex IEA--
    GO:0005737cytoplasm ----

    SMAD9 for ontologies           About GeneDecksing



    SMAD9 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    R&D Systems Antibodies for SMAD9 (Smad9, Smad8)
    Cell Signaling Technology (CST) Antibodies for SMAD9  (Smad8)
    OriGene Antibodies (see all 2): SMAD9
    OriGene Custom Antibody Services for SMAD9 
    GenScript Custom Superior Antibodies Services for SMAD9
    Novus Biologicals SMAD9 Antibodies
    Abcam antibodies for SMAD9 
    Uscn Antibodies for SMAD9
    ThermoFisher Antibodies for SMAD9

    Assay Products for SMAD9: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SMAD9
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SMAD9


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SMAD9 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR013019 MAD_homology_MH1
     IPR008984 SMAD_FHA_domain
     IPR001132 SMAD_dom_Dwarfin-type
     IPR017855 SMAD_dom-like
     IPR013790 Dwarfin

    Graphical View of Domain Structure for InterPro Entry O15198

    ProtoNet protein and cluster: O15198

    1 Blocks protein family: IPB001132 Dwarfin protein

    UniProtKB/Swiss-Prot: SMAD9_HUMAN, O15198
    Similarity: Belongs to the dwarfin/SMAD family
    Similarity: Contains 1 MH1 (MAD homology 1) domain
    Similarity: Contains 1 MH2 (MAD homology 2) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: SMAD9_HUMAN, O15198
    Function: Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD9 is a
    receptor-regulated SMAD (R-SMAD)

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding IEA--
    GO:0003700sequence-specific DNA binding transcription factor activity IEA--
    GO:0005515protein binding ----
    GO:0030618transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity TAS19018011
    GO:0046872metal ion binding IEA--
         
    SMAD9 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for SMAD9:
     Increased S DNA content, incre 

         12 MGI mutant phenotypes (inferred from 7 alleles(MGI details for Smad9):
     cardiovascular system  craniofacial  embryogenesis  growth/size  immune system 
     mortality/aging  nervous system  no phenotypic analysis  normal  reproductive system 
     respiratory system  tumorigenesis 

    SMAD9 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for SMAD9: Smad9tm1Jfm Smad9tm2.1Rob Smad9tm1.1Mwst
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SMAD9 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 2): SMAD9
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SMAD9
    8/24 QIAGEN miScript miRNA Assays for microRNAs that regulate SMAD9 (see all 24):
    hsa-miR-498 hsa-miR-495 hsa-miR-520f hsa-miR-892b hsa-miR-128 hsa-miR-512-3p hsa-miR-144 hsa-miR-3908
    SwitchGear 3'UTR luciferase reporter plasmidSMAD9 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SMAD9 (see all 7)
    OriGene shRNA RFP: SMAD9
    OriGene siRNA: SMAD9
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SMAD9
    Sirion Biotech Custom design and validation of potent shRNA sequences against SMAD9 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SMAD9
    Sirion Biotech Customized adenovirus for overexpression of SMAD9 
    Sirion Biotech Customized adenovirus for potent knockdown of SMAD9

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): SMAD9 (NM_005905)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SMAD9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SMAD9 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SMAD9
    Search LifeMap BioReagents cell lines for SMAD9
    Sirion Biotech Customized stable knockdown cell line services for SMAD9 
    Sirion Biotech Customized inducible knockdown cell line services for SMAD9
    Sirion Biotech Customized stable overexpressing cell line services for SMAD9
    Sirion Biotech Customized inducible overexpressing cell line services for SMAD9

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SMAD9


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ubiquitin-dependent degradation of the Smad complex terminates BMP2 signalling
    Ubiquitin-dependent degradation of the Smad complex terminates BMP2 signalling1.00
    ALK2 signaling events0.31
    Ubiquitin-dependent degradation controls basal levels of R-Smad1/5/80.38
    2Signaling by BMP
    Signaling by BMP1.00
    BMP receptor signaling0.31
    3TGF-beta/Smad Signaling
    TGF-beta/Smad Signaling1.00
    4TGF Beta Signaling Pathway
    TGF Beta Signaling Pathway1.00
    5Th17 Differentiation
    Th17 Differentiation1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 R&D Systems Pathways for SMAD9
        Th17 Differentiation
    TGF-beta Signaling Pathways


    1 Cell Signaling Technology (CST) Pathway for SMAD9
        TGF-beta/Smad Signaling

    4 BioSystems Pathways for SMAD9 
        TGF Beta Signaling Pathway
    ALK2 signaling events
    BMP receptor signaling
    ALK1 signaling events

    4        Reactome Pathways for SMAD9
        Ubiquitin-dependent degradation controls basal levels of R-Smad1/5/8
    Ubiquitin-dependent degradation of the Smad complex terminates BMP2 signalling
    Signal Transduction
    Signaling by BMP


    1         Kegg Pathway  (Kegg details for SMAD9):
        TGF-beta signaling pathway


    SMAD9 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SMAD9

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/191 Interacting proteins for SMAD9 (O151982, 3 ENSP000003691544) via UniProtKB, MINT, STRING, and/or I2D (see all 191)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    LMO4P619682, 3, ENSP000003595734MINT-61932 MINT-62061 I2D: score=4 STRING: ENSP00000359573
    SNRNP70P086212, 3, ENSP000002214484MINT-62151 MINT-61940 I2D: score=4 STRING: ENSP00000221448
    ZEB2O603152, 3, ENSP000003025014MINT-61938 MINT-62073 I2D: score=4 STRING: ENSP00000302501
    CSH1P012432, 3, ENSP000003332684MINT-62064 I2D: score=2 STRING: ENSP00000333268
    CSH2P012432, 3, ENSP000003766234MINT-62064 I2D: score=2 STRING: ENSP00000376623
    About this table

    Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001657ureteric bud development IEA--
    GO:0001666response to hypoxia IEA--
    GO:0001880Mullerian duct regression IEA--
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006468protein phosphorylation IEA--

    SMAD9 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SMAD9
    Search CenterWatch for drugs/clinical trials and news about SMAD9 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SMAD9 gene (2 alternative transcripts): 
    NM_001127217.2  NM_005905.5  

    Unigene Cluster for SMAD9:

    SMAD family member 9
    Hs.123119  [show with all ESTs]
    Unigene Representative Sequence: NM_001127217
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000399275 ENST00000350148(uc010tep.2) ENST00000483941 ENST00000379826(uc001uvw.3 uc001uvx.3)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone (see all 2): SMAD9
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SMAD9
    8/24 QIAGEN miScript miRNA Assays for microRNAs that regulate SMAD9 (see all 24):
    hsa-miR-498 hsa-miR-495 hsa-miR-520f hsa-miR-892b hsa-miR-128 hsa-miR-512-3p hsa-miR-144 hsa-miR-3908
    SwitchGear 3'UTR luciferase reporter plasmidSMAD9 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SMAD9 (see all 7)
    OriGene shRNA RFP: SMAD9
    OriGene siRNA: SMAD9
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SMAD9
    Sirion Biotech Custom design and validation of potent shRNA sequences against SMAD9 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): SMAD9 (NM_005905)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SMAD9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SMAD9 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SMAD9
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SMAD9
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SMAD9
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SMAD9

    Additional cDNA sequence: 

    AK095147.1 AK311686.1 AK314920.1 BC011559.1 BC067766.1 BC104760.1 BC104762.1 BC143240.1 
    BC143256.1 D83760.1 D83761.1 

    3 DOTS entries:

    DT.205683  DT.100740782  DT.95368602 

    24/77 AceView cDNA sequences (see all 77):

    W95374 BE252922 D83760 AI619431 BU688850 NM_005905 AU117590 BG388323 
    BX117187 BC011559 CA776703 D83761 AI142572 CA502976 CA776471 BM739654 
    BU684716 BU684555 BM747886 BX506816 Z40593 CD677698 BG390380 BX095366 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for SMAD9    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b
    SP1:                          -                           
    SP2:                                                      


    ECgene alternative splicing isoforms for SMAD9

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SMAD9 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTGTGTGGCC
    SMAD9 Expression
    About this image

    SMAD9 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Spinal CordPreganglionic ColumnPreganglionic Motor NeuronsMotor Neurons
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    Endoderm progenitor-like cells (Generation and expan...)
    Primitive gut tube-like cells (A scalable, suspensi...)

    See SMAD9 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SMAD9

    SOURCE GeneReport for Unigene cluster: Hs.123119

    UniProtKB/Swiss-Prot: SMAD9_HUMAN, O15198
    Tissue specificity: Expressed in heart, brain, placenta, lung, skeletal muscle, prostate, testis, ovary and small
    intestine. Also expressed in fetal brain, lung and kidney

        SABiosciences Expression via Pathway-Focused PCR Arrays including SMAD9: 
              Stem Cell Signaling in human mouse rat
              Transcription Factors in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SMAD9
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SMAD9
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SMAD9
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SMAD9
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SMAD9

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SMAD9 gene from 6/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SMAD91 SMAD family member 9 81.08(n)
    90.58(a)
      395543  NM_001024826.1  NP_001019997.1 
    lizard
    (Anolis carolinensis)
    Reptilia SMAD96
    --
    71(a)
    1 ↔ 1
    3(181430888-181447105)
    African clawed frog
    (Xenopus laevis)
    Amphibia MGC690162 hypothetical protein MGC69016 79.15(n)    BC057741.1 
    zebrafish
    (Danio rerio)
    Actinopterygii smad91 MAD homolog 9 (Drosophila) 74.96(n)
    83.26(a)
      445564  NM_001004014.1  NP_001004014.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Mad6
    Mothers against dpp
    62(a)
    1 → many
    2L(3146056-3159643)
    worm
    (Caenorhabditis elegans)
    Secernentea sma-21 Protein SMA-2 56.7(n)
    59.8(a)
      176229  NM_066530.3  NP_498931.2 


    ENSEMBL Gene Tree for SMAD9 (if available)
    TreeFam Gene Tree for SMAD9 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SMAD9 gene
    SMAD22  SMAD32  SMAD12  SMAD52  SMAD62  SMAD42  SMAD72  
    7 SIMAP similar genes for SMAD9 using alignment to 1 protein entry:     SMAD9_HUMAN:
    SMAD1    SMAD5    DKFZp781O1323    MADH5    DKFZp586M0622    SMAD3
    SMAD2

    SMAD9 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1413 NCBI SNPs in SMAD9 are shown (see all 1413    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 13 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs356527931,2
    C--37418492(+) TAGGT-/AATAGA 2 -- ds50013Minor allele frequency- A:0.17NA CSA 6
    rs1118055131,2
    C--37418633(+) CTTTCT/CAATAG 2 -- ds50012Minor allele frequency- C:0.03NA 122
    rs1914277411,2
    --37418681(+) AAGTGC/TTCATT 2 -- ds50010--------
    rs1162068341,2
    --37418710(+) TATCAC/TGTATT 2 -- ds50011Minor allele frequency- T:0.01WA 118
    rs1812527551,2
    --37418856(+) GAATTC/TAACAT 2 -- ds50010--------
    rs1853605211,2
    --37419010(+) ACAGTA/GTAAGT 2 -- ut310--------
    rs1900240521,2
    --37419030(+) ATGGAA/TAACCG 2 -- ut310--------
    rs1117171621,2
    C--37419035(+) TAACCT/GAAGCC 2 -- ut312Minor allele frequency- G:0.33NA CSA 3
    rs602709731,2
    C--37419043(+) GCCAAGTT/-ATTAT 2 -- ut311Minor allele frequency- -:0.50CSA 2
    rs2010779651,2
    --37419054(+) ATAAT-/AGAA  
            
    AGCAT
    2 -- ut310--------

    HapMap Linkage Disequilibrium report for SMAD9 (37418968 - 37494902 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for SMAD9
         1 CNV: 35162
    Human Gene Mutation Database (HGMD): SMAD9

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SMAD9
    DNA2.0 Custom Variant and Variant Library Synthesis for SMAD9

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SMAD9 for disorders           About GeneDecksing

    OMIM gene information: 603295   
    OMIM disorders: 178600  
    UniProtKB/Swiss-Prot: SMAD9_HUMAN, O15198
  • Defects in SMAD9 may be a cause of primary pulmonary hypertension (PPH1) [MIM:178600]. A rare disorder
  • characterized by plexiform lesions of proliferating endothelial cells in pulmonary arterioles. The lesions lead to
    elevated pulmonary arterial pression, right ventricular failure, and death. The disease can occur from infancy
    throughout life and it has a mean age at onset of 36 years. Penetrance is reduced. Although familial PPH1 is rare,
    cases secondary to known etiologies are more common and include those associated with the appetite-suppressant drugs

    8 diseases for SMAD9:    About MalaCards
    fibrodysplasia ossificans progressiva    pulmonary hypertension    primary pulmonary hypertension    hypertension
    hermaphroditism    lung cancer    hypoxia    prostatitis

    1 disease from the University of Copenhagen DISEASES database for SMAD9:
    Fibrodysplasia ossificans progressiva
    Human Genome Epidemiology (HuGE) Navigator: SMAD9 (2 documents)

    Export disorders for SMAD9 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SMAD9 gene, integrated from 9 sources (see all 35):
    (articles sorted by number of sources associating them with SMAD9)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning and characterization of a novel member of the human Mad gene family (MADH6). (PubMed id 9205116)1, 2, 3 Watanabe T.K.... Takahashi E. (1997)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. TGF-beta signaling by Smad proteins. (PubMed id 10708949)1, 2 Miyazono K. (2000)
    4. The Smad pathway. (PubMed id 10708948)1, 2 Wrana J.L. and Attisano L. (2000)
    5. Remarkable versatility of Smad proteins in the nucleus of transforming growth factor-beta activated cells. (PubMed id 10647776)1, 2 Verschueren K. and Huylebroeck D. (1999)
    6. TGF-beta signal transduction. (PubMed id 9759503)1, 2 Massague J. (1998)
    7. Smad8B, a Smad8 splice variant lacking the SSXS site that inhibits Smad8-mediated signalling. (PubMed id 10583507)1, 9 Nishita M....Shibuya H. (1999)
    8. CREBZF, a novel Smad8-binding protein. (PubMed id 22707059)1 Lee J.H....Kim I.Y. (2012)
    9. Functional dissection of lysine deacetylases reveals t hat HDAC1 and p300 regulate AMPK. (PubMed id 22318606)1 Lin Y.Y....Boeke J.D. (2012)
    10. Inhibition of mTORC1 kinase activates Smads 1 and 5 bu t not Smad8 in human prostate cancer cells, mediating cytostatic response to rap amycin. (PubMed id 22452883)1 Wahdan-Alaswad R.S....Danielpour D. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 4093 HGNC: 6774 AceView: SMAD9 Ensembl:ENSG00000120693 euGenes: HUgn4093
    ECgene: SMAD9 Kegg: 4093 H-InvDB: SMAD9

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SMAD9 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SMAD9 gene:
    Search GeneIP for patents involving SMAD9

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for SMAD9 (Smad9)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for SMAD9   OriGene shRNA RFP for SMAD9  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SMAD9   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SMAD9  
     OriGene Protein Over-expression Lysate for SMAD9   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SMAD9   OriGene 3'-UTR Clone for SMAD9  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SMAD9  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for SMAD9   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SMAD9   OriGene Custom Protein Services for SMAD9  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SMAD9
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SMAD9
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SMAD9
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SMAD9
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SMAD9
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SMAD9
     GenScript Custom Purified and Recombinant Proteins Services for SMAD9 GenScript cDNA clones with any tag delivered in your preferred vector for SMAD9
     GenScript Custom Assay Services for SMAD9 GenScript Custom Superior Antibodies Services for SMAD9
     GenScript Custom overexpressing Cell Line Services for SMAD9 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for SMAD9  (Smad8)

     Regulatory tfbs in SMAD9 promoter
     Search Chromatin IP Primers for SMAD9
     RT2 qPCR Primer Assay in human, mouse, rat SMAD9
     Search GNC Networks for SMAD9
     SABiosciences PCR Arrays including human, mouse, rat SMAD9
     Search Tocris compounds for SMAD9
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SMAD9 antibodies
     SMAD9 proteins
     SMAD9 lysates
     Antibodies for SMAD9
     See all of Abcam's Antibodies, Kits and Proteins for SMAD9
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SMAD9 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SMAD9
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SMAD9
     SwitchGear 3'UTR luciferase reporter plasmids for SMAD9
     SwitchGear Promoter luciferase reporter plasmids for SMAD9
     ThermoFisher Antibodies for SMAD9
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SMAD9
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SMAD9
    Sirion Biotech Customized:
     stable knockdown cell line services for SMAD9
     inducible knockdown cell line services for SMAD9
     design and validation of potent shRNA sequences against SMAD9
     adenovirus for potent knockdown of SMAD9
     adenovirus for overexpression of SMAD9
     stable overexpressing cell line services for SMAD9
     inducible overexpressing cell line services for SMAD9
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SMAD9 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4