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Aliases for SMAD1-AS2 Gene

Subcategory (RNA class) for SMAD1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SMAD1-AS2 Gene

  • SMAD1 Antisense RNA 2 2 3 5

External Ids for SMAD1-AS2 Gene

Previous GeneCards Identifiers for SMAD1-AS2 Gene

  • GC04M146420

Summaries for SMAD1-AS2 Gene

GeneCards Summary for SMAD1-AS2 Gene

SMAD1-AS2 (SMAD1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SMAD1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMAD1-AS2 Gene

Genomics for SMAD1-AS2 Gene

Regulatory Elements for SMAD1-AS2 Gene

Enhancers for SMAD1-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H145538 1.1 Ensembl ENCODE dbSUPER 13 -37.7 -37719 4.1 JUND PRDM6 SCRT2 ZNF600 ATF7 ATF2 SMAD1-AS1 SMAD1-AS2 SMAD1 LOC285422
GH04H145530 1 Ensembl ENCODE dbSUPER 13.5 -29.5 -29490 3.5 ZNF121 POLR2A MAFK SMAD1-AS2 SMAD1 OTUD4 MMAA SMAD1-AS1 LOC285422
GH04H145506 1.2 Ensembl ENCODE dbSUPER 0.7 -4.6 -4636 2.3 ELF3 GATAD2A JUN MAFG ZFP37 PRDM6 ZNF316 MAFF FOS HNF4A SMAD1-AS2 SMAD1-AS1
GH04H145500 0.9 Ensembl ENCODE dbSUPER 0.7 +1.7 1680 2.2 SCRT2 MMAA SMAD1-AS2 SMAD1
GH04H145480 1.5 Ensembl ENCODE dbSUPER 0.4 +19.9 19939 4.3 PKNOX1 FOXA2 ARNT ARID4B FEZF1 GLI4 ZNF2 GLIS2 RUNX3 TSHZ1 SMAD1 SMAD1-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SMAD1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SMAD1-AS2 Gene

Genomic Locations for SMAD1-AS2 Gene
5,932 bases
Minus strand

Genomic View for SMAD1-AS2 Gene

Genes around SMAD1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMAD1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMAD1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMAD1-AS2 Gene

Proteins for SMAD1-AS2 Gene

Post-translational modifications for SMAD1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMAD1-AS2 Gene

Domains & Families for SMAD1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMAD1-AS2 Gene

Function for SMAD1-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMAD1-AS2 Gene

Localization for SMAD1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMAD1-AS2 Gene

Pathways & Interactions for SMAD1-AS2 Gene

SuperPathways for SMAD1-AS2 Gene

No Data Available

Interacting Proteins for SMAD1-AS2 Gene

Gene Ontology (GO) - Biological Process for SMAD1-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SMAD1-AS2 Gene

Drugs & Compounds for SMAD1-AS2 Gene

No Compound Related Data Available

Transcripts for SMAD1-AS2 Gene

mRNA/cDNA for SMAD1-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMAD1-AS2 Gene

No ASD Table

Relevant External Links for SMAD1-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SMAD1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMAD1-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for SMAD1-AS2 Gene

This gene is overexpressed in Testis (x49.0).
genes like me logo Genes that share expression patterns with SMAD1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMAD1-AS2 Gene

Orthologs for SMAD1-AS2 Gene

Evolution for SMAD1-AS2 Gene

Gene Tree for SMAD1-AS2 (if available)
Gene Tree for SMAD1-AS2 (if available)

No data available for Orthologs for SMAD1-AS2 Gene

Paralogs for SMAD1-AS2 Gene

No data available for Paralogs for SMAD1-AS2 Gene

Variants for SMAD1-AS2 Gene

Sequence variations from dbSNP and Humsavar for SMAD1-AS2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000984959 -- 145,501,486(+) GAAGG(A/T)TCTAA intron-variant
rs1001118835 -- 145,498,540(+) CAGCA(A/G)TTGGT intron-variant
rs1001261363 -- 145,504,664(+) GCCAT(C/T)GTCTC intron-variant, upstream-variant-2KB
rs1001686227 -- 145,501,626(+) ATACA(A/G)CAGGA intron-variant
rs1001823440 -- 145,501,278(+) AGTGA(-/T)TTTTT intron-variant

Relevant External Links for SMAD1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMAD1-AS2 Gene

Disorders for SMAD1-AS2 Gene

Relevant External Links for SMAD1-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SMAD1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SMAD1-AS2 Gene

Publications for SMAD1-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for SMAD1-AS2 Gene

Sources for SMAD1-AS2 Gene

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