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Aliases for SLIT2-IT1 Gene

Subcategory (RNA class) for SLIT2-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SLIT2-IT1 Gene

  • SLIT2 Intronic Transcript 1 2 3
  • SLIT2 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for SLIT2-IT1 Gene

ORGUL Members for SLIT2-IT1 Gene

Summaries for SLIT2-IT1 Gene

GeneCards Summary for SLIT2-IT1 Gene

SLIT2-IT1 (SLIT2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLIT2-IT1 Gene

Genomics for SLIT2-IT1 Gene

Genomic Location for SLIT2-IT1 Gene

Start:
20,392,189 bp from pter
End:
20,394,856 bp from pter
Size:
2,668 bases
Orientation:
Plus strand

Genomic View for SLIT2-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SLIT2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLIT2-IT1 Gene

No data available for Regulatory Elements for SLIT2-IT1 Gene

Proteins for SLIT2-IT1 Gene

Post-translational modifications for SLIT2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLIT2-IT1 Gene

Domains for SLIT2-IT1 Gene

Gene Families for SLIT2-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SLIT2-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLIT2-IT1 Gene

Function for SLIT2-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SLIT2-IT1 Gene

Localization for SLIT2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SLIT2-IT1 Gene

Pathways for SLIT2-IT1 Gene

SuperPathways for SLIT2-IT1 Gene

No Data Available

Interacting Proteins for SLIT2-IT1 Gene

Gene Ontology (GO) - Biological Process for SLIT2-IT1 Gene

None

No data available for Pathways by source for SLIT2-IT1 Gene

Transcripts for SLIT2-IT1 Gene

mRNA/cDNA for SLIT2-IT1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SLIT2-IT1 Gene

SLIT2 intronic transcript 1 (non-protein coding):
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SLIT2-IT1
    • Block miRNA regulation of SLIT2-IT1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for SLIT2-IT1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SLIT2-IT1 Gene

    No ASD Table

    Relevant External Links for SLIT2-IT1 Gene

    GeneLoc Exon Structure for
    SLIT2-IT1
    ECgene alternative splicing isoforms for
    SLIT2-IT1

    Expression for SLIT2-IT1 Gene

    mRNA expression in normal human tissues for SLIT2-IT1 Gene

    mRNA differential expression in normal tissues according to GTEx for SLIT2-IT1 Gene

    This gene is overexpressed in Testis (49.4).

    SOURCE GeneReport for Unigene cluster for SLIT2-IT1 Gene Hs.665305

    genes like me logo Genes that share expressions with SLIT2-IT1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SLIT2-IT1 Gene

    Orthologs for SLIT2-IT1 Gene

    Evolution for SLIT2-IT1 Gene

    ENSEMBL:
    Gene Tree for SLIT2-IT1 (if available)
    TreeFam:
    Gene Tree for SLIT2-IT1 (if available)

    No data available for Orthologs for SLIT2-IT1 Gene

    Paralogs for SLIT2-IT1 Gene

    No data available for Paralogs for SLIT2-IT1 Gene

    Variants for SLIT2-IT1 Gene

    Relevant External Links for SLIT2-IT1 Gene

    HapMap Linkage Disequilibrium report
    SLIT2-IT1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SLIT2-IT1 Gene

    Disorders for SLIT2-IT1 Gene

    No disorders were found for SLIT2-IT1 Gene.

    No data available for UniProtKB/Swiss-Prot for SLIT2-IT1 Gene

    Publications for SLIT2-IT1 Gene

    1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

    Products for SLIT2-IT1 Gene

    Sources for SLIT2-IT1 Gene

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